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scnpilot_p_inoc_scaffold_2753_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2753_curated_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..226)
DNA (225bp) protein (75aa)
Integrating conjugative element protein n=1 Tax=Pseudomonas aeruginosa BL20 RepID=U9HP82_PSEAI
FIG141694: hypothetical protein in PFGI-1-like cluster
Uncharacterized protein {ECO:0000313|EMBL:EER62028.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scnpilot_p_inoc_scaffold_2753_curated_2
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(542..1789)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BSX2_XANC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ24087.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
scnpilot_p_inoc_scaffold_2753_curated_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1792..2352)
DNA (561bp) protein (187aa)
Coproporphyrinogen III oxidase n=4 Tax=Pseudomonas aeruginosa RepID=T5KYE0_PSEAI
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:EQL42055.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA03.;"
hypothetical protein rbh
scnpilot_p_inoc_scaffold_2753_curated_4
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2368..4002)
DNA (1635bp) protein (545aa)
Integrating conjugative element ParB n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5L8P4_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CDM23779.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2753_curated_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3995..4243)
DNA (249bp) protein (83aa)
UPI0003D3C1A9 related cluster n=1 Tax=unknown RepID=UPI0003D3C1A9
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:GAD24677.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2753_curated_6
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4227..5102)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8NAN5_PSEAI
chromosome partitioning related protein; K12055 chromosome partitioning related protein ParA rbh
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:ETE31659.1}; TaxID=1214121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa 32.;"
scnpilot_p_inoc_scaffold_2753_curated_7
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5145..5357)
DNA (213bp) protein (71aa)
Phage-related protein n=6 Tax=Proteobacteria RepID=Q9PCJ3_XYLFA
AlpA family regulatory protein; K07733 prophage regulatory protein
Transcriptional regulator in PFGI-1-like cluster {ECO:0000313|EMBL:CCH04877.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NH44784-1996.;"
scnpilot_p_inoc_scaffold_2753_curated_8
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5476..6222)
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=A1W5Z0_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ24093.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
scnpilot_p_inoc_scaffold_2753_curated_9
unknown

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6250..6339
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2753_curated_10
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7410..7979
DNA (570bp) protein (190aa)
anthranilate synthase component Ii; K01658 anthranilate synthase component II [EC:4.1.3.27]
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MBS2_ACIET
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:ACM31842.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_2753_curated_11
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8078..9112
DNA (1035bp) protein (345aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18]
Anthranilate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000255|HAMAP-Rule:MF_00211};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Anthranilate phosphoribosyltransferase n=2 Tax=Acidovorax RepID=TRPD_ACIET rbh
scnpilot_p_inoc_scaffold_2753_curated_12
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9144..9944
DNA (801bp) protein (267aa)
trpC; indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48]
Indole-3-glycerol phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000255|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000255|HAMAP-Rule:MF_00134};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Indole-3-glycerol phosphate synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=TRPC_ACIET rbh
scnpilot_p_inoc_scaffold_2753_curated_13
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10075..12756
DNA (2682bp) protein (894aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MBS6_ACIET
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ACM31846.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
PAS/PAC sensor-containing diguanylate cyclase
scnpilot_p_inoc_scaffold_2753_curated_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12805..13572
DNA (768bp) protein (256aa)
uracil-DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27]
uracil-DNA glycosylase n=1 Tax=Acidovorax avenae RepID=UPI0002EE0C3D
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_2753_curated_15
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13553..13945)
DNA (393bp) protein (131aa)
Chaperone protein HtpG n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MC29_ACIET
heat shock protein 90; K04079 molecular chaperone HtpG
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Displaying 15 items

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