ggKbase home page

scnpilot_p_inoc_scaffold_351_curated_76

Organism: scnpilot_dereplicated_Burkholderiales_7

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(85369..86148)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding s4 domain-containing protein; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 266.0
  • Bit_score: 446
  • Evalue 5.50e-123
RNA-binding S4 domain protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFT4_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 266.0
  • Bit_score: 446
  • Evalue 1.70e-122
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 262.0
  • Bit_score: 446
  • Evalue 1.90e-122

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGACTGAGCCAAACGACCACACCGTGCGCCTGGCCAAGCGCCTGGCCGCCGAGCACCACCTCTCGCGCAGCACCGCCGAGCAGTACATCGAGGGCGGCTGGGTCAGCGTGGACGGCCAGGTGGTCGAGCTGCCCGGCGCGCGCGTGGCGCCACAGCAGCGCGTGACACTGGCGCCGGACGCCAGCCTGCTGGAACTCACCCCCGTCACCCTGCTGCTGCACAAGCCTCCCGGCTACGAAGCCGGGCTGGGACTGGAGGCGGGCGGTGCCGCGCATGGCAGCCGCAGCCAGGGCGCGCCCTCGGCGCTCACGCTGCTGAACGCGCAAAGCCACCTGCCCGAGGATGCCGCGGGCATCCGCGTGCTGCTGCGCCATTTCAAACAGCTCGAATGCTTCACGCCGCTGCCCACGCCGGCCAGCGGCCTCGTGGTCTACACGCAGGACAAGCGCATCGCGCGCAAGCTGCAGGAGGACATCGAGACGCTGGAGCAGGAATGCATCGTCGAGGTGACGGGCCAGATCGCGGAAGGCGGTTTGCAGAAGCTTTGCCACGGCCTCTCGTTCAACGGCCGGCCGCTGCCGCCCATCAAGGTGAGCTGGCAAAGCGAGACCAAGCTGCGCTTCGCGCTCAAGGGCATCCGCCCCGGGCAGATTCCGGCCATGTGCGAGGCCGTGGGCCTGCGCGTGCTGGCCATCAAGCGCATCCGCATCGGCCGCGTGCCGCTGGCCAAGGTGCCCGAGGGGCAATGGCGTTACCTGCAGCCCTGGGAGAAGTTCTGA
PROTEIN sequence
Length: 260
MTEPNDHTVRLAKRLAAEHHLSRSTAEQYIEGGWVSVDGQVVELPGARVAPQQRVTLAPDASLLELTPVTLLLHKPPGYEAGLGLEAGGAAHGSRSQGAPSALTLLNAQSHLPEDAAGIRVLLRHFKQLECFTPLPTPASGLVVYTQDKRIARKLQEDIETLEQECIVEVTGQIAEGGLQKLCHGLSFNGRPLPPIKVSWQSETKLRFALKGIRPGQIPAMCEAVGLRVLAIKRIRIGRVPLAKVPEGQWRYLQPWEKF*