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scnpilot_p_inoc_scaffold_2441_curated_9

Organism: scnpilot_dereplicated_Burkholderiales_7

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 5362..5895

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugal transfer TRAF transmembrane protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWH3_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 176.0
  • Bit_score: 269
  • Evalue 3.40e-69
Conjugal transfer TRAF transmembrane protein {ECO:0000313|EMBL:GAO21509.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 176.0
  • Bit_score: 284
  • Evalue 1.40e-73
conjugal transfer TRAF transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 176.0
  • Bit_score: 269
  • Evalue 1.10e-69

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGACCCGCCGCCTGCTCCTTGCCTGCATGGGCGTCAGTATGGCGACGCTGTGCGCCTTGGCCGTCATGCAGGTGGGTGCGCCCGACCGCGTGCTCATGGTCTATAACCCGAGCAACAGCGTGCCGCGCGGTTGGTACCGCATCAGTCGCCTGGAAGACGTAGCCACGCTGCACGTCGGCAGCATCGTGCTGGCGCGGCTTCCTGCTGACGTGGCCGCGCTCGCAGCGCAGCGCGGCTACCTGCCCGGTGGCGTTCCGATCCTCAAGCGCATCGGCGCGCTCGCGCCGCAATCGGTGTGTGTTCGGGAGCAGGCTGTGCGCATCGACGGCGTCGTGGTGGCGAACGCGCGCACGCATGACGGCGAGCATCGTCCGCTGCAAGCCTGGCCGCAATGCCGATCCCTGGCGATGAGCGAGCTATTTCTGCTCAGCGACACGAACCCGGCGTCGTTCGACAGCCGCTACTTCGGGCCTATTGCCGCGTCGGCCGTGCTTGGCGTCGCGCAGCCCTTGTGGACATGGGGCGCGTCATGA
PROTEIN sequence
Length: 178
MTRRLLLACMGVSMATLCALAVMQVGAPDRVLMVYNPSNSVPRGWYRISRLEDVATLHVGSIVLARLPADVAALAAQRGYLPGGVPILKRIGALAPQSVCVREQAVRIDGVVVANARTHDGEHRPLQAWPQCRSLAMSELFLLSDTNPASFDSRYFGPIAASAVLGVAQPLWTWGAS*