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scnpilot_p_inoc_scaffold_2441_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2441_curated_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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224..565
DNA (342bp) protein (114aa)
Putative lipoprotein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWG7_VARPS
Lipoprotein {ECO:0000313|EMBL:GAO21521.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
lipoprotein
scnpilot_p_inoc_scaffold_2441_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(578..1273)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQF8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87624.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_p_inoc_scaffold_2441_curated_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1827..2378
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T888_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:GAO21515.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2441_curated_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2471..2767
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T887_ACIDE
Transcriptional regulator {ECO:0000313|EMBL:GAO21514.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2441_curated_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2795..3796
DNA (1002bp) protein (334aa)
Plasmid replication initiator protein-like protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWG9_VARPS
Plasmid replication initiator protein-like protein
Plasmid replication initiator protein-like protein {ECO:0000313|EMBL:ACS18724.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
scnpilot_p_inoc_scaffold_2441_curated_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3856..4578
DNA (723bp) protein (241aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T885_ACIDE
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:GAO21512.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein
scnpilot_p_inoc_scaffold_2441_curated_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4575..4838
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T884_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER59309.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2441_curated_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4835..5365
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWH2_VARPS
Glycosidase {ECO:0000313|EMBL:GAO21510.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2441_curated_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5362..5895
DNA (534bp) protein (178aa)
Putative conjugal transfer TRAF transmembrane protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWH3_VARPS
Conjugal transfer TRAF transmembrane protein {ECO:0000313|EMBL:GAO21509.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
conjugal transfer TRAF transmembrane protein
scnpilot_p_inoc_scaffold_2441_curated_10
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6271..8226
DNA (1956bp) protein (652aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000369DE09
hypothetical protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
scnpilot_p_inoc_scaffold_2441_curated_11
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8276..9226)
DNA (951bp) protein (317aa)
Transcriptional regulator n=1 Tax=Polaromonas sp. CF318 RepID=J2KDL6_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL78310.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
transcriptional regulator, LysR family
scnpilot_p_inoc_scaffold_2441_curated_12
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9333..10316
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3CTP4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL78309.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
putative Bug-like extra-cytoplasmic solute receptor, TTT-family
scnpilot_p_inoc_scaffold_2441_curated_13
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10321..11751
DNA (1431bp) protein (477aa)
dan; putative D-aminoacylase (EC:3.5.1.81); K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
N-acyl-D-aspartate/D-glutamate deacylase n=1 Tax=Polaromonas sp. CF318 RepID=J2KZ63_9BURK
D-aminoacylase {ECO:0000313|EMBL:EYS96586.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
scnpilot_p_inoc_scaffold_2441_curated_14
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11748..12521
DNA (774bp) protein (258aa)
aspartate racemase; K01779 aspartate racemase [EC:5.1.1.13]
Aspartate racemase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12C11_POLSJ
Aspartate racemase {ECO:0000313|EMBL:ABE43931.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Displaying 14 items

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