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scnpilot_p_inoc_scaffold_1165_curated_12

Organism: scnpilot_dereplicated_Burkholderiales_7

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(13441..13977)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilin structural subunit n=4 Tax=Pseudomonas aeruginosa RepID=I6S412_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 178.0
  • Bit_score: 203
  • Evalue 2.30e-49
type IV pilin structural subunit similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 178.0
  • Bit_score: 203
  • Evalue 7.30e-50
Type 4 pilin {ECO:0000313|EMBL:AAC41410.1}; Type IV pilin {ECO:0000313|EMBL:AAL12242.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 178.0
  • Bit_score: 203
  • Evalue 3.20e-49

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGAAGCGTACTCTGCAACAAGGCTTTACCCTGATCGAACTGATGATCGTGGTGGCCATCATCGGTATTCTGGCTGCTGTGGCTCTGCCTGCTTATCAGGATTACACCGTGCGCACCCGCGTGGTGGAAGGGCTGACCCTGGCGTCTGGCGCTAAGGCCATGGTGAACGAAGTAGCCACTTTGAACGATCTGACTGTGGCTGCAACCACCTGGAATGCACAGCAGGGCAACACCGGTGCCACCTCTAAATACGTTACTTCCGTGCGGATTGCTGCTGGCACAGGTGAAATCACTATCGCGTACAACAACGCAACTGTTGGTGCAATTCCCGCTGGTGCTACACTCCGCTTGAGGCCGTTCATCAAAACCAATGCCACCACCTTTCAGCAACTGGCTGCCGCCATTACTGCTGGCAACACTGGAGCCGTGGACTGGGCCTGTGCCTCCGTAACTCAAGCCGCCGCAACTGCGCGCACAATGACCGGCACGACTCCTGGCACGTTGCCTGCCAAGTTTGCACCTGCCGAGTGCCGTTGA
PROTEIN sequence
Length: 179
MKRTLQQGFTLIELMIVVAIIGILAAVALPAYQDYTVRTRVVEGLTLASGAKAMVNEVATLNDLTVAATTWNAQQGNTGATSKYVTSVRIAAGTGEITIAYNNATVGAIPAGATLRLRPFIKTNATTFQQLAAAITAGNTGAVDWACASVTQAAATARTMTGTTPGTLPAKFAPAECR*