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scnpilot_p_inoc_scaffold_1165_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1165_curated_1
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..450
DNA (450bp) protein (150aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] id=12551755 bin=BDI species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
glyceraldehyde-3-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
scnpilot_p_inoc_scaffold_1165_curated_2
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(682..900)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ISF4_BORPD
SlyX family protein {ECO:0000313|EMBL:EXU79536.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
hypothetical protein; K03745 SlyX protein
scnpilot_p_inoc_scaffold_1165_curated_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1005..1349)
DNA (345bp) protein (115aa)
ribosomal subunit Interface protein id=12551758 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ribosomal subunit Interface protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1165_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1438..3405)
DNA (1968bp) protein (656aa)
guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1] id=12551759 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1165_curated_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3386..6958)
DNA (3573bp) protein (1191aa)
TonB-dependent receptor n=1 Tax=Acidovorax sp. NO-1 RepID=H0BS70_9BURK
FecR protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1165_curated_6
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7035..7388
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TD11_ACIDE
Membrane protein {ECO:0000313|EMBL:KJA12284.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1165_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7356..8762)
DNA (1407bp) protein (469aa)
Peptidase M48 Ste24p n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAW0_ALIDK
peptidase M48 Ste24p
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1165_curated_8
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8994..9482
DNA (489bp) protein (163aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T586_ACIDE
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
molybdenum cofactor biosynthesis protein C
scnpilot_p_inoc_scaffold_1165_curated_9
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9546..10142
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DY08_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV32800.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1165_curated_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10146..11699)
DNA (1554bp) protein (518aa)
O-antigen polymerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I532_9BURK
O-antigen polymerase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1165_curated_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12039..12827)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Neisseria flavescens SK114 RepID=C5TKY0_NEIFL
fimbrial assembly protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1165_curated_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13441..13977)
DNA (537bp) protein (179aa)
Type IV pilin structural subunit n=4 Tax=Pseudomonas aeruginosa RepID=I6S412_PSEAI
type IV pilin structural subunit
Type 4 pilin {ECO:0000313|EMBL:AAC41410.1}; Type IV pilin {ECO:0000313|EMBL:AAL12242.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
scnpilot_p_inoc_scaffold_1165_curated_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14158..14949)
DNA (792bp) protein (264aa)
Metal-dependent hydrolase, beta-lactamase superfamily III n=1 Tax=Acidovorax sp. CF316 RepID=J0TYT1_9BURK
3',5'-cyclic-nucleotide phosphodiesterase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1165_curated_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14974..17256)
DNA (2283bp) protein (761aa)
Putative transmembrane sensor domain protein n=1 Tax=Acidovorax sp. CF316 RepID=J1E9G9_9BURK
adenylate/guanylate cyclase with chase sensor
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1165_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17285..17944)
DNA (660bp) protein (220aa)
FHA domain-containing protein id=12550715 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
FHA domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1165_curated_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17995..18801)
DNA (807bp) protein (269aa)
protein serine/threonine phosphatase id=12550716 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
protein serine/threonine phosphatase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1165_curated_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18798..21449)
DNA (2652bp) protein (884aa)
Serine/threonine protein kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6U6_9BURK
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1165_curated_18
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21651..22544)
DNA (894bp) protein (298aa)
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699, ECO:0000313|EMBL:CAL95948.1};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KAU2_AZOSB
scnpilot_p_inoc_scaffold_1165_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22567..23730)
DNA (1164bp) protein (388aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
sucC; succinyl-CoA synthetase subunit beta; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG12_9BURK
scnpilot_p_inoc_scaffold_1165_curated_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23898..24830
DNA (933bp) protein (311aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] id=12550722 bin=BDI species=Chryseobacterium taeanense genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BDI organism_group=Betaproteobacteria
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1165_curated_21
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24889..25341)
DNA (453bp) protein (151aa)
Regulatory protein RecX n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUQ0_9BURK
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
regulatory protein RecX; K03565 regulatory protein
scnpilot_p_inoc_scaffold_1165_curated_22
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25409..25849)
DNA (441bp) protein (147aa)
Protein RecA n=2 Tax=Acidovorax RepID=A1TW37_ACIAC
recombination protein RecA; K03553 recombination protein RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Displaying 22 items

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