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scnpilot_p_inoc_scaffold_628_curated_16

Organism: scnpilot_dereplicated_Burkholderiales_7

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(16858..17415)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12552975 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 183.0
  • Bit_score: 289
  • Evalue 3.30e-75
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 181.0
  • Bit_score: 247
  • Evalue 4.60e-63
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 186.0
  • Bit_score: 288
  • Evalue 8.00e-75

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGCGAACCCTTCTGCGCCACCTCGATGACAGCGAGTGCCTCGCCCGTGCCCGGCAGGGCGAGGTGGCCGCGTTCTCGGAGCTGGTGGCGCGCTACCAGGACCGCATCTACCGCTTCCTGCTGCGGCTCACGCGCTCCCCCGACGATGCCCTGGAGCTGACGCAGGAGACCTTTCTGAACGCCTACCAGGCCCTGGCGCGCTGGCAGCCCGAAGCGCAGTTCACGACCTGGCTGTTCCGCATTGCGCGCAACCAGGCCTTCGACTGGCTGCGGCGCGGCAAGCGGGCCGAGTTCGTGGCGCTGGACGAGGAACAGGAGCACGGCCTTGCCGATCCCGGCCCGGGACCGGATGCAACGCTGGAGACCACGCAAAGGCTGCGGGGCCTGGAGCGGGCCCTGGCCCGGCTGCCCACGGAGCACCGCGAAATCCTGCTGCTGCGGGAGATCGAAGACCTGTCCTACGAGGACATCGCCACCGTGCTGGACATCAGCCTGGGCACCGTCAAATCGCGCATCGCCCGTGCGCGCGCCAGCCTGTTGGACAAAATGCCGCGCTGA
PROTEIN sequence
Length: 186
MRTLLRHLDDSECLARARQGEVAAFSELVARYQDRIYRFLLRLTRSPDDALELTQETFLNAYQALARWQPEAQFTTWLFRIARNQAFDWLRRGKRAEFVALDEEQEHGLADPGPGPDATLETTQRLRGLERALARLPTEHREILLLREIEDLSYEDIATVLDISLGTVKSRIARARASLLDKMPR*