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scnpilot_p_inoc_scaffold_196_curated_97

Organism: scnpilot_dereplicated_Burkholderiales_7

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 111878..112219

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9S8_ACIDE similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 125.0
  • Bit_score: 186
  • Evalue 1.10e-44
RNA-binding protein {ECO:0000313|EMBL:EXU81545.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 114.0
  • Bit_score: 188
  • Evalue 6.90e-45
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 112.0
  • Bit_score: 184
  • Evalue 2.20e-44

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Taxonomy

Comamonas aquatica → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGGACAACAAACTTTATGTGGGCAACCTGCCCTACACGTTCCGCGACAACGATCTGGAACAAACCTTCAGCGCCTTCGGCGCCGTGGCCAGCGCCAAAGTGATGATGGAGCGCGACACCGGCCGCTCCAAGGGCTTTGGCTTCGTCGAGATGGGCAGCGCCGCCGAGGCGCAGGCCGCCATCAACGGCGTGAATGGCAAGAGCTTCGGCGGCCGTGACCTGGTGGTCAACGTGGCACGCCCCATGGAAGCCCGCGCACCGCGCAGCGGCGGCTTTGGTGGTGGCTACGGCGGCGGCGGCCGCAGCGGCGGTGGCGGCTACGGCGGCCGCAGCAGCTACTGA
PROTEIN sequence
Length: 114
MDNKLYVGNLPYTFRDNDLEQTFSAFGAVASAKVMMERDTGRSKGFGFVEMGSAAEAQAAINGVNGKSFGGRDLVVNVARPMEARAPRSGGFGGGYGGGGRSGGGGYGGRSSY*