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scnpilot_p_inoc_scaffold_196_curated_98

Organism: scnpilot_dereplicated_Burkholderiales_7

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 112474..112929

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein id=12550682 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 171.0
  • Bit_score: 266
  • Evalue 1.40e-68
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 188.0
  • Bit_score: 240
  • Evalue 3.50e-61
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 170.0
  • Bit_score: 262
  • Evalue 3.80e-67

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGGGCAACAAACTGTATGTGGGCAACCTGCCCTACAGCGTGCGTGACAACGACCTGGAGCAAGCCTTCAGCGCCTTCGGCAGCGTCACCAGCGCCAAGGTGATGATGGAGCGTGACACTGGCCGCTCCAAGGGCTTTGGCTTCGTCGAAATGGGCAGCGATGCCGAGGCCCAGGCGGCCATCAACGGCATGAACGGCCAGCCGCTGGGCGGTCGCGCCATCGTCGTCAACGAGGCACGTCCCATGGAAGCACGCCCGCCGCGCTCGGGCGGCTTTGGCGGCGGCGGCGGTGGCCGCACGGGCGGCGGCGGCTACGGTGGCGGACGTGAAGGCGGCTATGGCGGCGGCGGTCGCAGCGAAGGCGGCTTCCGCAGCCCCTACGGCTCGGGCCCGCGCGGCGGCGGCGGTGGTGGCCGCGGCAATGGCGGCGGCGGTTACGGCGGCGGCGGCTACTGA
PROTEIN sequence
Length: 152
MGNKLYVGNLPYSVRDNDLEQAFSAFGSVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRAIVVNEARPMEARPPRSGGFGGGGGGRTGGGGYGGGREGGYGGGGRSEGGFRSPYGSGPRGGGGGGRGNGGGGYGGGGY*