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scnpilot_p_inoc_scaffold_1415_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1415_curated_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13..843)
DNA (831bp) protein (277aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEW00537.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEW00537.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFT8_NIAKG
3-oxoacyl-(acyl-carrier-protein) reductase
scnpilot_p_inoc_scaffold_1415_curated_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(862..1857)
DNA (996bp) protein (332aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFT9_NIAKG
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEW00538.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_1415_curated_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2146..2700)
DNA (555bp) protein (185aa)
antirestriction protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035EAC2A
Antirestriction ArdA family protein
Antirestriction ArdA family protein {ECO:0000313|EMBL:ACT92138.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1415_curated_4
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3085..3714)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003787D03
Contig132, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74833.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_1415_curated_5
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3896..5098
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035CA0D0
Uncharacterized protein {ECO:0000313|EMBL:KGO80800.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1415_curated_6
unknown

Not on your lists

5110..5670
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003788B73
scnpilot_p_inoc_scaffold_1415_curated_7
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5841..6296
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RXP6_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ18110.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_1415_curated_8
unknown

Not on your lists

6468..6770
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1415_curated_9
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6827..8194)
DNA (1368bp) protein (456aa)
Tetratricopeptide domain protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RXP4_LEAB4
tetratricopeptide domain-containing protein
Tetratricopeptide domain protein {ECO:0000313|EMBL:ADQ18108.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_1415_curated_10
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8206..11412)
DNA (3207bp) protein (1069aa)
TonB-dependent receptor plug n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CEI5_SPHS2
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADZ76680.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_1415_curated_11
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11434..12795)
DNA (1362bp) protein (454aa)
Redoxin domain protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RXP2_LEAB4
redoxin domain protein
Redoxin domain protein {ECO:0000313|EMBL:ADQ18106.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_1415_curated_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13327..13566
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037BA81C
XRE family transcriptional regulator {ECO:0000313|EMBL:AHF14121.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
helix-turn-helix domain-containing protein
scnpilot_p_inoc_scaffold_1415_curated_13
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13701..13967)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y421_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU05464.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_p_inoc_scaffold_1415_curated_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14877..15311
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000361B92F
Uncharacterized protein {ECO:0000313|EMBL:EKA90979.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1415_curated_15
unknown

Not on your lists

comp(15398..15523)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1415_curated_16
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15528..16793)
DNA (1266bp) protein (422aa)
2-amino-3-ketobutyrate CoA ligase; K00639 glycine C-acetyltransferase [EC:2.3.1.29]
7-keto-8-aminopelargonate synthetase-like enzyme n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JP50_9FLAO
Contig132, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74836.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
scnpilot_p_inoc_scaffold_1415_curated_17
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17315..17839
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037D6416
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92186.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1415_curated_18
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17941..18264
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035EE1E4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92187.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1415_curated_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18707..19039
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037A85B0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92188.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1415_curated_20
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19076..21088
DNA (2013bp) protein (671aa)
Bacteroides conjugative transposon TraG-like protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FE11_FLAJ1
Conjugal transfer protein TraG {ECO:0000313|EMBL:KIA82441.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Type IV secretory pathway VirB4 components-like protein
Displaying 20 items

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