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scnpilot_p_inoc_scaffold_210_curated

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_210_curated_1
unknown

Not on your lists

comp(2..127)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_210_curated_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(262..1161)
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W784_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94362.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1296..1622)
DNA (327bp) protein (109aa)
heme biosynthesis protein HemY n=1 Tax=Dyadobacter beijingensis RepID=UPI00037B47A7
iron-sulfur cluster assembly accessory protein; K13628 iron-sulfur cluster assembly protein
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:ACT94363.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1861..2793)
DNA (933bp) protein (311aa)
homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39]
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Homoserine kinase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W786_DYAFD
scnpilot_p_inoc_scaffold_210_curated_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2811..5267)
DNA (2457bp) protein (819aa)
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I; K12524 bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
Aspartate kinase {ECO:0000313|EMBL:ACT94365.1}; EC=1.1.1.3 {ECO:0000313|EMBL:ACT94365.1};; EC=2.7.2.4 {ECO:0000313|EMBL:ACT94365.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
aspartokinase n=1 Tax=Dyadobacter beijingensis RepID=UPI000376B739
scnpilot_p_inoc_scaffold_210_curated_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5355..6119)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000374E872
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94366.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_7
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6330..6590
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W789_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94367.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6594..9551)
DNA (2958bp) protein (986aa)
D-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:ACT94368.1}; EC=1.1.2.4 {ECO:0000313|EMBL:ACT94368.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
D-lactate dehydrogenase (Cytochrome) n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W790_DYAFD
D-lactate dehydrogenase; K06911
scnpilot_p_inoc_scaffold_210_curated_9
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9621..11207
DNA (1587bp) protein (529aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W791_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94369.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_10
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11240..12499)
DNA (1260bp) protein (420aa)
histidine kinase n=1 Tax=Dyadobacter beijingensis RepID=UPI000375970E
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACT94370.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_11
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12496..13173)
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W793_DYAFD
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACT94371.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13330..14796
DNA (1467bp) protein (489aa)
transporter n=1 Tax=Dyadobacter beijingensis RepID=UPI0003769754
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ACT94372.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_13
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14900..19273
DNA (4374bp) protein (1458aa)
acriflavin resistance protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037221FB
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACT94373.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_210_curated_14
Acetobacter pasteurianus, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19375..19668
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036C9521
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCT60369.1}; TaxID=1266844 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter pasteurianus 386B.;"
scnpilot_p_inoc_scaffold_210_curated_15
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19671..19895
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000379729F
transcriptional regulator, xre family
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_p_inoc_scaffold_210_curated_16
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19951..20526)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037CDE3E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94374.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_17
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20734..22101)
DNA (1368bp) protein (456aa)
oxidoreductase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003763C3E
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACT94375.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_18
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22264..22707
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W798_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94376.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_19
unknown

Not on your lists

22704..22859
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_210_curated_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22868..23779)
DNA (912bp) protein (304aa)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:ACT94377.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ACT94377.1};; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
ATPase n=1 Tax=Dyadobacter beijingensis RepID=UPI000374A74E
monosaccharide-transporting ATPase; K10439 ribose transport system substrate-binding protein
scnpilot_p_inoc_scaffold_210_curated_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23872..24804)
DNA (933bp) protein (311aa)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:ACT94378.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ACT94378.1};; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
sugar ABC transporter permease n=1 Tax=Dyadobacter beijingensis RepID=UPI000368A5C6
monosaccharide-transporting ATPase; K10440 ribose transport system permease protein
scnpilot_p_inoc_scaffold_210_curated_22
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24923..26425)
DNA (1503bp) protein (501aa)
ABC transporter; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter related n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W7A1_DYAFD
ABC transporter related {ECO:0000313|EMBL:ACT94379.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_23
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26507..27667)
DNA (1161bp) protein (387aa)
Oxidoreductase domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W7A2_DYAFD
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACT94380.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_24
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27827..28861)
DNA (1035bp) protein (345aa)
xylose isomerase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003817764
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACT94381.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_25
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28989..30203)
DNA (1215bp) protein (405aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W7A4_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94382.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_26
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30379..31470)
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W7A5_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94383.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_27
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31557..32369)
DNA (813bp) protein (271aa)
Alpha/beta hydrolase fold protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W7A6_DYAFD
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ACT94384.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_28
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32471..33298)
DNA (828bp) protein (276aa)
xylose isomerase domain-containing protein; K03335 inosose dehydratase [EC:4.2.1.44]
Xylose isomerase domain protein TIM barrel n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W7A7_DYAFD
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACT94385.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_29
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33327..34376)
DNA (1050bp) protein (350aa)
signal peptide protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000363278F
signal peptide
Signal peptide {ECO:0000313|EMBL:ACT94386.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_210_curated_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34404..35255)
DNA (852bp) protein (284aa)
xylose isomerase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003603382
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACT94387.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 1-30 of 118 in total

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