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scnpilot_p_inoc_scaffold_1981_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1981_curated_1
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3..3722)
DNA (3720bp) protein (1240aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VJV4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK58556.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
yd repeat protein
scnpilot_p_inoc_scaffold_1981_curated_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3745..5052)
DNA (1308bp) protein (436aa)
Similar to hedgehog protein n=1 Tax=Cyanidioschyzon merolae strain 10D RepID=M1VKD3_CYAME
Uncharacterized protein {ECO:0000313|EMBL:GAO43106.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
similar to hedgehog protein
scnpilot_p_inoc_scaffold_1981_curated_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5098..7437)
DNA (2340bp) protein (780aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QDM6_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38156.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_1981_curated_4
unknown

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7908..8117
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1981_curated_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8264..9076
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSS3_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92895.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1981_curated_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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9077..11716
DNA (2640bp) protein (880aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSS4_DYAFD
Uncharacterized protein {ECO:0000313|EMBL:ACT92896.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
hypothetical protein
scnpilot_p_inoc_scaffold_1981_curated_7
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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11941..12228
DNA (288bp) protein (96aa)
Transposase IS3/IS911 family protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RUQ3_LEAB4
transposase is3/is911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ADQ16054.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_1981_curated_8
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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12225..13070
DNA (846bp) protein (282aa)
Transposase n=1 Tax=Joostella marina DSM 19592 RepID=I3C1D8_9FLAO
Transposase {ECO:0000313|EMBL:EIJ37431.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
integrase catalytic region
scnpilot_p_inoc_scaffold_1981_curated_9
unknown

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comp(13175..13372)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1981_curated_10
unknown

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13415..13507
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1981_curated_11
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13794..14288
DNA (495bp) protein (165aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XEV8_CELAD
Cell filamentation protein Fic {ECO:0000313|EMBL:KFF06318.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
filamentation induced by camp protein fic
scnpilot_p_inoc_scaffold_1981_curated_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14370..14861
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VT62_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96426.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1981_curated_13
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14854..15228
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003647A5D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96427.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying 13 items

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