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scnpilot_p_inoc_scaffold_1668_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1668_curated_1
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1..180
DNA (180bp) protein (60aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJZ1_9BACT
scnpilot_p_inoc_scaffold_1668_curated_2
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

258..422
DNA (165bp) protein (55aa)
Transposase IS66 n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J0I1_CYCMS
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:AEL23897.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_p_inoc_scaffold_1668_curated_3
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(573..3602)
DNA (3030bp) protein (1010aa)
dhkJ2; DhkJ2; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
Multi-sensor Hybrid Histidine Kinase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GW78_9SPHI
Multi-sensor Hybrid Histidine Kinase {ECO:0000313|EMBL:EOR96016.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
scnpilot_p_inoc_scaffold_1668_curated_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5743..7269
DNA (1527bp) protein (509aa)
Beta-lactamase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QI04_SPILD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ADB36892.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_1668_curated_5
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8104..8520
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MJH8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KEQ30210.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
two component LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_1668_curated_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8754..9116
DNA (363bp) protein (121aa)
Alpha/beta hydrolase fold protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUX5_DYAFD
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ACT93112.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1668_curated_7
unknown

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9124..9279
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1668_curated_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9302..11755)
DNA (2454bp) protein (818aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YG06_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC92698.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1668_curated_9
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(11905..12255)
DNA (351bp) protein (117aa)
Transcriptional regulator, PadR-like family n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QIY2_SPILD
PadR family transcriptional regulator {ECO:0000313|EMBL:AKD56600.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
PadR family transcriptional regulator
scnpilot_p_inoc_scaffold_1668_curated_10
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(13016..13663)
DNA (648bp) protein (216aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S8F9_9FLAO
Histidine kinase {ECO:0000313|EMBL:KEO75234.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
NAD-dependent epimerase/dehydratase; K07118
scnpilot_p_inoc_scaffold_1668_curated_11
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13770..14138
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037A3CB5
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:CDS93385.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
transcriptional regulator, HxlR family
scnpilot_p_inoc_scaffold_1668_curated_12
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(14490..14867)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XV02_FLAIG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG52972.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
scnpilot_p_inoc_scaffold_1668_curated_13
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(14854..16182)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI0003785007
Cl-channel voltage-gated family protein
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:AEE48735.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_1668_curated_14
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16854..17555)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XTU4_FLAIG
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KIA88896.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
scnpilot_p_inoc_scaffold_1668_curated_15
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18136..19623)
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036AED13
Uncharacterized protein {ECO:0000313|EMBL:KEQ28370.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
beta-lactamase
scnpilot_p_inoc_scaffold_1668_curated_16
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20970..22445
DNA (1476bp) protein (492aa)
histidine kinase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B2E9DE
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:EHQ25733.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
GAF sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_1668_curated_17
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22505..22912
DNA (408bp) protein (136aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJZ1_9BACT
histidine kinase
scnpilot_p_inoc_scaffold_1668_curated_18
Paenibacillus sp. FSL R5-808, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22924..23445)
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus vortex V453 RepID=E5YWP9_9BACL
Uncharacterized protein {ECO:0000313|EMBL:ETT33761.1}; TaxID=1227076 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-808.;"
scnpilot_p_inoc_scaffold_1668_curated_19
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23432..24982)
DNA (1551bp) protein (517aa)
Transposase IS66 n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C8W8_SPHS2
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:ADZ81437.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_1668_curated_20
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25032..25319)
DNA (288bp) protein (96aa)
IS66 Orf2 family protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C8W7_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:CDT33761.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
IS66 Orf2 family protein
scnpilot_p_inoc_scaffold_1668_curated_21
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(25373..25651)
DNA (279bp) protein (93aa)
Transposase, IS66 family n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=Q1VRF6_PSYTT
transposase, IS66 family
Transposase, IS66 family {ECO:0000313|EMBL:AFU70374.1}; Transposase, IS66 family, Orf1 {ECO:0000313|EMBL:AFU68598.1}; Transposase, IS66 family, Orf2 {ECO:0000313|EMBL:AFU68755.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus torquis (strain ATCC 700755 / ACAM 623).;"
scnpilot_p_inoc_scaffold_1668_curated_22
unknown

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comp(25679..25852)
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 22 items

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