ggKbase home page

scnpilot_p_inoc_scaffold_13_curated

Search features with annotation key words

Displaying items 1-30 of 500 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_13_curated_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

117..881
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W305_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95718.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1040..1909
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035E0E61
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95718.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_3
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1974..3062)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000365065D
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:AEE52102.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_13_curated_4
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3080..4033)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003671EB1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE52103.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_13_curated_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4192..4449
DNA (258bp) protein (86aa)
Filamentous hemagglutinin outer membrane protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W301_DYAFD
filamentous hemagglutinin outer membrane protein
Filamentous hemagglutinin outer membrane protein {ECO:0000313|EMBL:ACT95714.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4608..8771
DNA (4164bp) protein (1388aa)
Carbohydrate binding family 6 n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W300_DYAFD
Carbohydrate binding family 6 {ECO:0000313|EMBL:ACT95713.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
carbohydrate binding family protein
scnpilot_p_inoc_scaffold_13_curated_7
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8824..9870)
DNA (1047bp) protein (349aa)
Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2Z9_DYAFD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT95712.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10064..10561
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000372810C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95711.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_9
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(10558..11682)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003793F9B
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_p_inoc_scaffold_13_curated_10
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11797..12975
DNA (1179bp) protein (393aa)
Peptidase M23 n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2Z6_DYAFD
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ACT95709.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_11
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13037..14149)
DNA (1113bp) protein (371aa)
sterol desaturase n=1 Tax=Dyadobacter beijingensis RepID=UPI00037A4A2A
fatty acid hydroxylase
Fatty acid hydroxylase {ECO:0000313|EMBL:ACT95708.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14184..14306)
DNA (123bp) protein (41aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2Z4_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95707.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_13
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14814..15767)
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2Z3_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95706.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15764..16189)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003773447
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95705.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16393..18324
DNA (1932bp) protein (644aa)
Histidine kinase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2Z1_DYAFD
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACT95704.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_16
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18346..18990
DNA (645bp) protein (215aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2Z0_DYAFD
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACT95703.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_17
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18987..19256)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K736_AZOSB
yoeB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL94641.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
scnpilot_p_inoc_scaffold_13_curated_18
unknown

Not on your lists

comp(19247..19456)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_13_curated_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19556..21001)
DNA (1446bp) protein (482aa)
arylsulfatase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036EF99B
sulfatase
Sulfatase {ECO:0000313|EMBL:ACT95702.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21300..21599)
DNA (300bp) protein (100aa)
Plasmid maintenance system antidote protein, XRE family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2Y8_DYAFD
XRE family transcriptional regulator
Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:ACT95701.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21966..23480)
DNA (1515bp) protein (505aa)
sulfatase; K01130 arylsulfatase [EC:3.1.6.1]
arylsulfatase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003731BB8
Sulfatase {ECO:0000313|EMBL:ACT95699.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_22
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23589..23774)
DNA (186bp) protein (62aa)
sterol desaturase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003772C9B
fatty acid hydroxylase
Fatty acid hydroxylase {ECO:0000313|EMBL:ACT95696.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_23
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24023..25081
DNA (1059bp) protein (353aa)
Transcriptional regulator, LacI family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2Y2_DYAFD
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACT95695.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_24
unknown

Not on your lists

comp(25145..25306)
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_13_curated_25
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25473..26477
DNA (1005bp) protein (335aa)
dehydrogenase n=1 Tax=Dyadobacter beijingensis RepID=UPI00038027F0
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACT95694.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_26
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26509..27897
DNA (1389bp) protein (463aa)
Glutamine--scyllo-inositol transaminase {ECO:0000313|EMBL:ACT95693.1}; EC=2.6.1.50 {ECO:0000313|EMBL:ACT95693.1};; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
glutamine--scyllo-inositol aminotransferase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003673E28
glutamine--scyllo-inositol transaminase
scnpilot_p_inoc_scaffold_13_curated_27
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27894..29261
DNA (1368bp) protein (456aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2X9_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95692.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_28
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29309..30607
DNA (1299bp) protein (433aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2X8_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95691.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_29
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30652..32019
DNA (1368bp) protein (456aa)
NADH-dependent dehydrogenase n=1 Tax=Dyadobacter beijingensis RepID=UPI00035CF9D3
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACT95690.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32023..33345
DNA (1323bp) protein (441aa)
Glucose/galactose transporter n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2X6_DYAFD
glucose/galactose transporter
Glucose/galactose transporter {ECO:0000313|EMBL:ACT95689.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 1-30 of 500 in total

View Taxonomy