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scnpilot_p_inoc_scaffold_13_curated

Search features with annotation key words

Displaying items 241-270 of 500 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_13_curated_241
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

261711..263279
DNA (1569bp) protein (523aa)
Beta-glycosidase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W127_DYAFD
beta-glycosidase
Beta-glycosidase {ECO:0000313|EMBL:ACT95482.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_242
GWF2_OD1_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

263322..264377
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000377FE1F
Uncharacterized protein {ECO:0000313|EMBL:KKR33872.1}; TaxID=1618642 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWF2_39_8.;"
hypothetical protein
scnpilot_p_inoc_scaffold_13_curated_243
unknown

Not on your lists

comp(264413..264664)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_13_curated_244
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

265170..265646
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W126_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95481.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_245
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

265612..266052
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W125_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95480.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_246
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

266126..266452
DNA (327bp) protein (109aa)
ArsR family transcriptional regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI00035CEEE2
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACT95479.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_247
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

266442..266936
DNA (495bp) protein (165aa)
ATPase n=1 Tax=Dyadobacter beijingensis RepID=UPI000381173C
Activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ACT95478.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_248
unknown

Not on your lists

266961..267092
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_13_curated_249
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(267094..268512)
DNA (1419bp) protein (473aa)
Amino acid permease-associated region n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W122_DYAFD
amino acid permease-associated protein; K03294 basic amino acid/polyamine antiporter, APA family
Amino acid permease-associated region {ECO:0000313|EMBL:ACT95477.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_250
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(268639..269898)
DNA (1260bp) protein (420aa)
FAD dependent oxidoreductase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
FAD dependent oxidoreductase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W121_DYAFD
FAD dependent oxidoreductase {ECO:0000313|EMBL:ACT95476.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_251
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(270026..271027)
DNA (1002bp) protein (334aa)
hydroxyproline-2-epimerase; K12658 4-hydroxyproline epimerase [EC:5.1.1.8]
Proline racemase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W120_DYAFD
Proline racemase {ECO:0000313|EMBL:ACT95475.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_252
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(271157..272632)
DNA (1476bp) protein (492aa)
aldehyde dehydrogenase; K14519 NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4]
Aldehyde Dehydrogenase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W119_DYAFD
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACT95474.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_253
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(272735..273667)
DNA (933bp) protein (311aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
dihydrodipicolinate synthase n=1 Tax=Dyadobacter beijingensis RepID=UPI00035DEF56
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:ACT95473.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_254
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(273777..275717)
DNA (1941bp) protein (647aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037F3F75
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36493.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_13_curated_255
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(275733..277772)
DNA (2040bp) protein (680aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036B783B
transglutaminase
Transglutaminase domain protein {ECO:0000313|EMBL:ADB36492.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_13_curated_256
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

277986..279077
DNA (1092bp) protein (364aa)
oxidoreductase n=1 Tax=Dyadobacter beijingensis RepID=UPI000372C541
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACT95472.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_257
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

279771..283001
DNA (3231bp) protein (1077aa)
collagen-binding protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036FB577
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT95469.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_258
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

283028..284611
DNA (1584bp) protein (528aa)
carbohydrate-binding protein SusD n=1 Tax=Dyadobacter beijingensis RepID=UPI00037555EE
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ACT95468.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_259
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

284704..286752
DNA (2049bp) protein (683aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W112_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95467.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_260

Not on your lists

286892..287848
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037243F4
Marine sediment metagenome DNA, contig: S03H2_L05329 {ECO:0000313|EMBL:GAH32621.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
two component regulator propeller domain-containing protein
scnpilot_p_inoc_scaffold_13_curated_261
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(287900..288679)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003629244
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95466.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_262
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(288726..288983)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=2 Tax=Dyadobacter RepID=C6W110_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95465.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_263
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(289092..290642)
DNA (1551bp) protein (517aa)
gltX; glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Glutamate--tRNA ligase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W109_DYAFD
scnpilot_p_inoc_scaffold_13_curated_264
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(290670..291038)
DNA (369bp) protein (123aa)
Endoribonuclease L-PSP n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W108_DYAFD
endoribonuclease L-PSP; K07567 TdcF protein
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACT95463.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_265
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(291095..291610)
DNA (516bp) protein (172aa)
Thioesterase superfamily protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W107_DYAFD
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ACT95462.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_266
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(291628..292473)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000378CE91
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95461.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_267
unknown

Not on your lists

292500..293660
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036B7A60
scnpilot_p_inoc_scaffold_13_curated_268
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(293726..294421)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037001FF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95460.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_269
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(294491..297028)
DNA (2538bp) protein (846aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000365A222
phage shock protein PspC
Phage shock protein C, PspC {ECO:0000313|EMBL:ACT95459.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_13_curated_270
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(297058..297432)
DNA (375bp) protein (125aa)
Transcriptional regulator, PadR-like family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W103_DYAFD
PadR-like family transcriptional regulator; K10947 PadR family transcriptional regulator, regulatory protein PadR
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ACT95458.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 241-270 of 500 in total

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