ggKbase home page

scnpilot_p_inoc_scaffold_224_curated

Search features with annotation key words

Displaying items 31-60 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_224_curated_31
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28680..30065)
DNA (1386bp) protein (462aa)
alpha-N-acetylgalactosaminidase (EC:3.2.1.49)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000361459E
Acetylgalactosaminidase {ECO:0000313|EMBL:AKD55454.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_p_inoc_scaffold_224_curated_32
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30078..31160)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037AFA3E
Uncharacterized protein {ECO:0000313|EMBL:AKD55455.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_224_curated_33
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31172..31915)
DNA (744bp) protein (248aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
short-chain dehydrogenase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003720644
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT94255.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_34
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31984..32940)
DNA (957bp) protein (319aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037BF658
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:ADB36673.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_224_curated_35
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32953..33891)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003803624
Uncharacterized protein {ECO:0000313|EMBL:AKD55459.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_224_curated_36
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33888..35021)
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037C22DC
Muconate lactonizing mandelate racemase {ECO:0000313|EMBL:AKD55460.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
muconate lactonizing mandelate racemase protein
scnpilot_p_inoc_scaffold_224_curated_37
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(35018..35962)
DNA (945bp) protein (315aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003802B62
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AKD55461.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_p_inoc_scaffold_224_curated_38
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(35994..36374)
DNA (381bp) protein (127aa)
endoribonuclease L-PSP n=1 Tax=Dyadobacter beijingensis RepID=UPI000364F326
endoribonuclease L-PSP; K07567 TdcF protein
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADB36677.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_224_curated_39
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(36552..37337)
DNA (786bp) protein (262aa)
creatininase; K01470 creatinine amidohydrolase [EC:3.5.2.10]
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000369CB80
Creatininase {ECO:0000313|EMBL:AKD55463.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_p_inoc_scaffold_224_curated_40
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(37513..39573)
DNA (2061bp) protein (687aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E962A
Glycoside hydrolase {ECO:0000313|EMBL:AKD55456.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
glycoside hydrolase family protein
scnpilot_p_inoc_scaffold_224_curated_41
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(39600..41186)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QG72_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36679.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_224_curated_42
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(41199..44381)
DNA (3183bp) protein (1061aa)
TonB-dependent receptor plug n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QG73_SPILD
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADB36680.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_224_curated_43
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(44688..45326)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035F61C1
GntR family transcriptional regulator {ECO:0000313|EMBL:AKD55466.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_224_curated_44
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

45559..46830
DNA (1272bp) protein (424aa)
Putative secreted protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6B6_DYAFD
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:ACT94256.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_45
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

46827..49787
DNA (2961bp) protein (987aa)
Cellulose synthase (UDP-forming) {ECO:0000313|EMBL:ACT94257.1}; EC=2.4.1.12 {ECO:0000313|EMBL:ACT94257.1};; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Cellulose synthase (UDP-forming) n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6B7_DYAFD
Cellulose synthase
scnpilot_p_inoc_scaffold_224_curated_46
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(49770..51449)
DNA (1680bp) protein (560aa)
Beta-mannanase-like protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6B8_DYAFD
beta-mannanase-like protein
Beta-mannanase-like protein {ECO:0000313|EMBL:ACT94258.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_47
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(51653..51985)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036F5B87
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94259.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_48
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(52195..53370)
DNA (1176bp) protein (392aa)
glutathionylspermidine synthase; K01917 glutathionylspermidine synthase [EC:6.3.1.8]
glutathionylspermidine synthase n=1 Tax=Dyadobacter beijingensis RepID=UPI00037F0D60
Glutathionylspermidine synthase {ECO:0000313|EMBL:ACT94260.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_49
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(53416..54027)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6C1_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94261.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_50
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(54211..55497)
DNA (1287bp) protein (429aa)
Aminotransferase class V n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6C2_DYAFD
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ACT94262.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_51
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(55564..56328)
DNA (765bp) protein (255aa)
peptidase M23 n=1 Tax=Dyadobacter beijingensis RepID=UPI0003801F55
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ACT94263.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_52
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

56490..57461
DNA (972bp) protein (324aa)
aldo/keto reductase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003678ADB
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACT94264.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_53
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(57521..57931)
DNA (411bp) protein (137aa)
DoxX family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6C6_DYAFD
DoxX family protein; K15977 putative oxidoreductase
DoxX family protein {ECO:0000313|EMBL:ACT94266.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_54
unknown

Not on your lists

comp(57947..58036)
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_224_curated_55
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

58109..60370
DNA (2262bp) protein (754aa)
TonB-denpendent receptor n=1 Tax=Dyadobacter beijingensis RepID=UPI00037EA4D4
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT94267.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_56
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

60517..60825
DNA (309bp) protein (103aa)
Isoamylase N-terminal domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6C8_DYAFD
isoamylase N-terminal domain-containing protein
Isoamylase N-terminal domain protein {ECO:0000313|EMBL:ACT94268.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_57
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(60945..61865)
DNA (921bp) protein (307aa)
xylose isomerase domain-containing protein; K01816 hydroxypyruvate isomerase [EC:5.3.1.22]
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
xylose isomerase n=1 Tax=Dyadobacter beijingensis RepID=UPI000372EF8B
scnpilot_p_inoc_scaffold_224_curated_58
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(61946..64555)
DNA (2610bp) protein (870aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000375BFFE
membrane-bound dehydrogenase domain-containing protein
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:ACT94270.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_59
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

64824..65015
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6D3_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94273.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_60
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

65027..65272
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6D4_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94274.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 31-60 of 125 in total

View Taxonomy