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scnpilot_p_inoc_scaffold_224_curated

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_224_curated_1
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(47..1363)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00036B6606
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AEI49714.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_224_curated_2
unknown

Not on your lists

comp(1617..1766)
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_224_curated_3
unknown

Not on your lists

1909..2340
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_224_curated_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2707..5847
DNA (3141bp) protein (1047aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000368F4D2
Heme-binding protein {ECO:0000313|EMBL:EDY19836.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
membrane-bound dehydrogenase
scnpilot_p_inoc_scaffold_224_curated_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5956..7206
DNA (1251bp) protein (417aa)
transcriptional regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI00036D1055
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92778.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7270..8142
DNA (873bp) protein (291aa)
Transcriptional regulator n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VRS6_DYAFD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ACT92779.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_7
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8305..8601)
DNA (297bp) protein (99aa)
YCII-related domain-containing protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4JZN7_CLOPA
YCII-related domain-containing protein
YCII-related domain-containing protein {ECO:0000313|EMBL:AGK95778.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
scnpilot_p_inoc_scaffold_224_curated_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8775..9176
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6A6_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94246.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_9
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9173..9403)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037A429A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94247.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_10
unknown

Not on your lists

comp(9484..9801)
DNA (318bp) protein (106aa)
Putative uncharacterized protein id=1976280 bin=GWE2_Bacteroidetes_42_39 species=Muricauda ruestringensis genus=Muricauda taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
scnpilot_p_inoc_scaffold_224_curated_11
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9823..10005)
DNA (183bp) protein (61aa)
Putative uncharacterized protein id=1976284 bin=GWE2_Bacteroidetes_42_39 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_p_inoc_scaffold_224_curated_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9965..11137)
DNA (1173bp) protein (391aa)
Putative acetyl xylan esterase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6A8_DYAFD
putative acetyl xylan esterase
Putative acetyl xylan esterase {ECO:0000313|EMBL:ACT94248.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_13
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11328..11675
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6A9_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94249.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11782..12294
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000364AF53
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT94250.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12294..13751
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035E5532
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94251.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_16
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13799..16009)
DNA (2211bp) protein (737aa)
TonB-dependent receptor n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6B2_DYAFD
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent receptor {ECO:0000313|EMBL:ACT94252.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_17
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16078..17220)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGS0_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI47010.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_224_curated_18
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17418..18635)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037240E6
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEE47940.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_224_curated_19
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18642..21428)
DNA (2787bp) protein (929aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E8486
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AEE47941.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_224_curated_20
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21448..22023)
DNA (576bp) protein (192aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036A57D9
carboxymuconolactone decarboxylase
scnpilot_p_inoc_scaffold_224_curated_21
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22120..22686)
DNA (567bp) protein (189aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000382E132
peroxidase family protein
scnpilot_p_inoc_scaffold_224_curated_22
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22831..23388)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003763282
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94253.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_23
unknown

Not on your lists

23428..23529
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_224_curated_24
unknown

Not on your lists

comp(23567..23662)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_224_curated_25
unknown

Not on your lists

23840..24265
DNA (426bp) protein (142aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_224_curated_26
unknown

Not on your lists

24279..24707
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_224_curated_27
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24722..27256
DNA (2535bp) protein (845aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI000379D3C0
Peptidase M4 {ECO:0000313|EMBL:KIA97713.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
peptidase M4, thermolysin
scnpilot_p_inoc_scaffold_224_curated_28
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27207..27500
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003670B0C
carbohydrate binding family protein
Carbohydrate binding family 6 {ECO:0000313|EMBL:ACT93481.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_224_curated_29
unknown

Not on your lists

27606..28244
DNA (639bp) protein (213aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_224_curated_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28307..28645
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000371587E
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ACT94254.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 1-30 of 125 in total

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