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scnpilot_p_inoc_scaffold_1015_curated

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1015_curated_1
unknown

Not on your lists

142..516
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1015_curated_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

659..1141
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W679_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92559.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1015_curated_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1550..1885)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1A6_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91963.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1015_curated_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1875..3149)
DNA (1275bp) protein (425aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1A5_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91962.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1015_curated_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3146..3985)
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1A4_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91961.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1015_curated_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4007..4963)
DNA (957bp) protein (319aa)
Hemerythrin HHE cation binding domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1A3_DYAFD
hemerythrin HHE cation binding domain-containing protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:ACT91960.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1015_curated_7
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5032..5799)
DNA (768bp) protein (256aa)
Nitrous-oxide metabolic protein NosY n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1A2_DYAFD
nitrous-oxide metabolic protein NosY; K01992 ABC-2 type transport system permease protein
Nitrous-oxide metabolic protein NosY {ECO:0000313|EMBL:ACT91959.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1015_curated_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5807..6562)
DNA (756bp) protein (252aa)
ABC transporter related n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1A1_DYAFD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACT91958.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1015_curated_9
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6559..7812)
DNA (1254bp) protein (418aa)
Periplasmic copper-binding n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1A0_DYAFD
copper-binding protein; K07218 nitrous oxidase accessory protein
Periplasmic copper-binding {ECO:0000313|EMBL:ACT91957.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1015_curated_10
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7825..8859)
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W199_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91956.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1015_curated_11
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8871..10847)
DNA (1977bp) protein (659aa)
nitrous-oxide reductase; K00376 nitrous-oxide reductase [EC:1.7.2.4]
Nitrous-oxide reductase {ECO:0000313|EMBL:ACT91955.1}; EC=1.7.2.4 {ECO:0000313|EMBL:ACT91955.1};; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Nitrous-oxide reductase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W198_DYAFD
scnpilot_p_inoc_scaffold_1015_curated_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10877..11338)
DNA (462bp) protein (154aa)
Cytochrome c class I n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W197_DYAFD
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ACT91954.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1015_curated_13
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11632..12267
DNA (636bp) protein (212aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W196_DYAFD
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACT91953.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1015_curated_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12318..13532
DNA (1215bp) protein (405aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W195_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91952.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1015_curated_15
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13720..14349)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0003154049
67 kDa myosin-cross-reactive antigen family protein; K10254 myosin-crossreactive antigen
67 kDa myosin-cross-reactive antigen family protein {ECO:0000313|EMBL:ADL69892.1}; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM; 571 / NCIB 9385 / NCA 3814) (Clostridium thermosaccharolyticum).;"
scnpilot_p_inoc_scaffold_1015_curated_16
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14558..15214)
DNA (657bp) protein (219aa)
Myosin-cross-reactive antigen n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6X2F5_9ALTE
Myosin-cross-reactive antigen {ECO:0000313|EMBL:ENO15218.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanhaiticus D15-8W.;"
myosin-cross-reactive antigen; K10254 myosin-crossreactive antigen
scnpilot_p_inoc_scaffold_1015_curated_17
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16166..17191
DNA (1026bp) protein (342aa)
transcriptional regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI000371CABE
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACT96509.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1015_curated_18
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17484..18146
DNA (663bp) protein (221aa)
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; K03778 D-lactate dehydrogenase [EC:1.1.1.28]
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036AA090
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KGO95135.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
scnpilot_p_inoc_scaffold_1015_curated_19
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

18178..18897
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000367DE86
NADPH-quinone reductase {ECO:0000313|EMBL:KER11146.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
putative NAD(P)H dehydrogenase
scnpilot_p_inoc_scaffold_1015_curated_20
unknown

Not on your lists

comp(19314..19496)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1015_curated_21
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20007..24398
DNA (4392bp) protein (1464aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000371EE02
Cation efflux protein {ECO:0000313|EMBL:ABG58783.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
cation efflux protein; K15726 cobalt-zinc-cadmium resistance protein CzcA
scnpilot_p_inoc_scaffold_1015_curated_22
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24441..25649
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E620F
yegM; membrane-fusion protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_1015_curated_23
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25653..26273
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EAG1_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48065.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_1015_curated_24
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26287..28308
DNA (2022bp) protein (674aa)
heavy metal translocating P-type ATPase (EC:3.6.3.5); K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AEI52060.1}; EC=3.6.3.5 {ECO:0000313|EMBL:AEI52060.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
Heavy metal translocating P-type ATPase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ER19_RUNSL
scnpilot_p_inoc_scaffold_1015_curated_25
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28537..29634
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W008_9FLAO
Thiol oxidoreductase {ECO:0000313|EMBL:KIC89880.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
lipoprotein precursor
scnpilot_p_inoc_scaffold_1015_curated_26
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29636..30079
DNA (444bp) protein (148aa)
Rieske n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GTT4_9BACT
Rieske {ECO:0000313|EMBL:CCH57535.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Rieske (2Fe-2S) iron-sulfur domain-containing protein
scnpilot_p_inoc_scaffold_1015_curated_27
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30076..30720
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003713333
Uncharacterized protein {ECO:0000313|EMBL:KIC89882.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
Displaying 27 items

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