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scnpilot_p_inoc_scaffold_5_curated

Search features with annotation key words

Displaying items 1-30 of 823 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_5_curated_1
unknown

Not on your lists

comp(651..770)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_5_curated_2
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

812..1948
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI0003636702
hypothetical protein
Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_p_inoc_scaffold_5_curated_3
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

1950..2666
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11NV0_CYTH3
ABC transporter
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_5_curated_4
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2872..4248)
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002F93EED
Uncharacterized protein {ECO:0000313|EMBL:AHF14001.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
putative transcriptional regulator
scnpilot_p_inoc_scaffold_5_curated_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5248..5658)
DNA (411bp) protein (137aa)
Helix-turn-helix domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3B2_DYAFD
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ACT92216.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_5_curated_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5811..6725
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3B3_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92217.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_5_curated_7
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6932..7678
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3B4_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92218.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_5_curated_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7673..8011)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3B5_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92219.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_5_curated_9
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8134..8460
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3B6_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92220.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_5_curated_10
Leptospira weilii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

8847..9314
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Leptospira weilii RepID=K8KJN0_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EMN89597.1}; TaxID=1088542 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira weilii str. UI 13098.;"
hypothetical protein
scnpilot_p_inoc_scaffold_5_curated_11
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9333..9968)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037FFDB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU07072.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_p_inoc_scaffold_5_curated_12
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10451..10963)
DNA (513bp) protein (171aa)
Appr-1-p processing domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KXF3_HALH1
Appr-1-p processing protein
Appr-1-p processing domain protein {ECO:0000313|EMBL:AEE49361.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_5_curated_13
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11191..12486)
DNA (1296bp) protein (432aa)
Integrase family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3B9_DYAFD
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACT92223.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_5_curated_14
unknown

Not on your lists

13055..13234
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_5_curated_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13231..13812
DNA (582bp) protein (194aa)
RNA polymerase subunit sigma-24 n=1 Tax=Dyadobacter beijingensis RepID=UPI00036F0299
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT92225.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_5_curated_16
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13873..14481
DNA (609bp) protein (203aa)
alkylated DNA repair protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000379761F
2OG-Fe(II) oxygenase
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:ACT92226.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_5_curated_17
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14716..15255
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000380C684
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_p_inoc_scaffold_5_curated_18
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15346..16842)
DNA (1497bp) protein (499aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3C3_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92227.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_5_curated_19
unknown

Not on your lists

17012..17149
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_5_curated_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17159..18592)
DNA (1434bp) protein (478aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3C5_DYAFD
NodT family RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ACT92229.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_5_curated_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18582..21737)
DNA (3156bp) protein (1052aa)
multidrug transporter AcrB n=1 Tax=Dyadobacter beijingensis RepID=UPI000374669C
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ACT92230.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_p_inoc_scaffold_5_curated_22
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21810..22895)
DNA (1086bp) protein (362aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3C7_DYAFD
RND family efflux transporter MFP subunit; K03585 membrane fusion protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACT92231.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_5_curated_23
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23049..23471)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036116D8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92232.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_5_curated_24
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23875..24723)
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3C9_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92233.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_5_curated_25
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24738..25844)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003797A80
Histidine kinase {ECO:0000313|EMBL:AKD58180.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
signal transduction histidine kinase LytS
scnpilot_p_inoc_scaffold_5_curated_26
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25856..27985)
DNA (2130bp) protein (710aa)
Isoquinoline 1-oxidoreductase; K07303 isoquinoline 1-oxidoreductase, beta subunit [EC:1.3.99.16]
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003678014
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:AKD58177.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_p_inoc_scaffold_5_curated_27
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28110..29960)
DNA (1851bp) protein (617aa)
DNA mismatch repair protein MutS domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3D3_DYAFD
DNA mismatch repair protein MutS domain-containing protein
DNA mismatch repair protein MutS domain protein {ECO:0000313|EMBL:ACT92237.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_5_curated_28
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30011..31726)
DNA (1716bp) protein (572aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036AC8A1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92238.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_5_curated_29
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31898..34558
DNA (2661bp) protein (887aa)
Putative PAS/PAC sensor protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3D5_DYAFD
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ACT92239.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
putative PAS/PAC sensor protein
scnpilot_p_inoc_scaffold_5_curated_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34555..35151)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W403_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92240.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 1-30 of 823 in total

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