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scnpilot_p_inoc_scaffold_503_curated

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_503_curated_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2..382
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003770B35
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92559.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_503_curated_2
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(547..1773)
DNA (1227bp) protein (409aa)
tyrosine recombinase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4E37C
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AFL85793.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_p_inoc_scaffold_503_curated_3
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2420..3061
DNA (642bp) protein (214aa)
Uncharacterized protein n=3 Tax=Myroides odoratimimus RepID=H1GJW4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:AJF69107.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
transposase; K07485 transposase
scnpilot_p_inoc_scaffold_503_curated_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3634..4857
DNA (1224bp) protein (408aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VS18_DYAFD
transposase IS116/IS110/IS902 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:ACT94539.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_503_curated_5
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5135..6883)
DNA (1749bp) protein (583aa)
SusD/RagB family lipoprotein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L932_ZOBGA
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:KEO75904.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
SusD/RagB family lipoprotein
scnpilot_p_inoc_scaffold_503_curated_6
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6929..10012)
DNA (3084bp) protein (1028aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003600480
Carbohydrate-binding protein SusC {ECO:0000313|EMBL:KEO75903.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
TonB-dependent Receptor
scnpilot_p_inoc_scaffold_503_curated_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10203..11246
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNM0_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64120.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_503_curated_8
unknown

Not on your lists

11483..12163
DNA (681bp) protein (227aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_503_curated_9
unknown

Not on your lists

comp(12193..12351)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_503_curated_10
unknown

Not on your lists

comp(12434..12976)
DNA (543bp) protein (181aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_503_curated_11
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13280..13657)
DNA (378bp) protein (126aa)
TonB-dependent receptor n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZI9_DYAFD
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACT93467.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_503_curated_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13668..14084)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRE5_CHIPD
hypothetical protein; K00389 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64384.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_503_curated_13
unknown

Not on your lists

comp(14419..14871)
DNA (453bp) protein (151aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_503_curated_14
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14929..16038)
DNA (1110bp) protein (370aa)
Membrane fusion protein mtrC n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG17_9BACT
Membrane fusion protein mtrC {ECO:0000313|EMBL:CCH52842.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_503_curated_15
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16028..19225)
DNA (3198bp) protein (1066aa)
Nodulation protein nolG n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG16_9BACT
Nodulation protein nolG {ECO:0000313|EMBL:CCH52841.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
acriflavin resistance protein
scnpilot_p_inoc_scaffold_503_curated_16
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19238..20617)
DNA (1380bp) protein (460aa)
Outer membrane efflux protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG15_9BACT
Outer membrane efflux protein {ECO:0000313|EMBL:CCH52840.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
outer membrane efflux protein
scnpilot_p_inoc_scaffold_503_curated_17
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20624..21031)
DNA (408bp) protein (136aa)
Two-component system, unclassified family, response regulator n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG14_9BACT
Two-component system, unclassified family, response regulator {ECO:0000313|EMBL:CCH52839.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
response regulator receiver protein
scnpilot_p_inoc_scaffold_503_curated_18
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21178..21855
DNA (678bp) protein (226aa)
Transcriptional regulatory protein cusR n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG13_9BACT
Transcriptional regulatory protein cusR {ECO:0000313|EMBL:CCH52838.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_503_curated_19
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21852..23225
DNA (1374bp) protein (458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Histidine kinase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG12_9BACT
histidine kinase
scnpilot_p_inoc_scaffold_503_curated_20
unknown

Not on your lists

23376..23645
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_503_curated_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23700..24434)
DNA (735bp) protein (245aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W252_DYAFD
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACT92025.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_503_curated_22
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24431..25456)
DNA (1026bp) protein (342aa)
Signal transduction histidine kinase, LytS n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W251_DYAFD
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ACT92024.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_503_curated_23
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25698..26075
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W250_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92023.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_503_curated_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26083..27021
DNA (939bp) protein (313aa)
Beta-lactamase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJ16_CHIPD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ACU60100.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_503_curated_25
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27272..27925
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000374F866
Global nitrogen regulator {ECO:0000313|EMBL:KHJ38734.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
Crp/Fnr family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
scnpilot_p_inoc_scaffold_503_curated_26
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28210..29631
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2QH97_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKF54117.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_503_curated_27
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29669..29974
DNA (306bp) protein (102aa)
Rhodanese-like domain-containing protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SRK6_9FLAO
Sulfurtransferase {ECO:0000313|EMBL:KFD40061.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
Rhodanese-like domain-containing protein
scnpilot_p_inoc_scaffold_503_curated_28
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29991..30554
DNA (564bp) protein (188aa)
YeeE/YedE family protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000366EFF0
Transmembrane protein {ECO:0000313|EMBL:KFF20891.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hypothetical protein; K07112
scnpilot_p_inoc_scaffold_503_curated_29
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30556..31179
DNA (624bp) protein (208aa)
Methyltransferase family protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C1Y3_9FLAO
SAM-dependent methyltransferase {ECO:0000313|EMBL:KIC64258.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
type 12 methyltransferase
scnpilot_p_inoc_scaffold_503_curated_30
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31180..31689
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X6I9_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:GAO44022.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein; K07112
Displaying items 1-30 of 69 in total

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