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scnpilot_p_inoc_scaffold_173_curated

Search features with annotation key words

Displaying items 1-30 of 170 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_173_curated_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

197..1255
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036166A6
TraJ family protein conjugative transposon
TraJ family protein conjugative transposon {ECO:0000313|EMBL:ACT92192.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_173_curated_2
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1261..1878
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003789491
Conjugal transfer protein {ECO:0000313|EMBL:KDN54668.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
hypothetical protein
scnpilot_p_inoc_scaffold_173_curated_3
unknown

Not on your lists

1884..2297
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003701A12
scnpilot_p_inoc_scaffold_173_curated_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2275..3606
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000364E22C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92195.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_173_curated_5
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3635..4426
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000368D8E0
Conjugative transposon protein TraN {ECO:0000313|EMBL:KGO85877.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
hypothetical protein
scnpilot_p_inoc_scaffold_173_curated_6
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4454..5236
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000372E17A
Uncharacterized protein {ECO:0000313|EMBL:KGO95044.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
hypothetical protein
scnpilot_p_inoc_scaffold_173_curated_7
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5233..5577
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035DF7B2
Uncharacterized protein {ECO:0000313|EMBL:KGO87077.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
hypothetical protein
scnpilot_p_inoc_scaffold_173_curated_8
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5672..7333)
DNA (1662bp) protein (554aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZB5_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07325.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_173_curated_9
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7693..8586)
DNA (894bp) protein (298aa)
DNA polymerase iii, beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
DNA polymerase III subunit beta n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TMY4_MARTH
scnpilot_p_inoc_scaffold_173_curated_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8930..9466)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LAG1_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR42675.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
scnpilot_p_inoc_scaffold_173_curated_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9488..10717)
DNA (1230bp) protein (410aa)
Putative plasmid maintenance system antidote protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LAG0_PARD8
plasmid maintenance system antidote protein
Putative plasmid maintenance system antidote protein {ECO:0000313|EMBL:ABR42674.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
scnpilot_p_inoc_scaffold_173_curated_12
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11038..12861)
DNA (1824bp) protein (608aa)
ParB-like partition protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDT4_9SPHI
ParB-like partition protein {ECO:0000313|EMBL:EHQ24274.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
parB-like partition protein
scnpilot_p_inoc_scaffold_173_curated_13
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12955..13338)
DNA (384bp) protein (128aa)
Single-stranded DNA-binding protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W304_9FLAO
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
single stranded DNA-binding protein
scnpilot_p_inoc_scaffold_173_curated_14
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13827..14696)
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RVJ7_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ17061.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_173_curated_15
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15008..15667
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens Q2-87 RepID=J2MNR2_PSEFL
Uncharacterized protein {ECO:0000313|EMBL:KFF00679.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
scnpilot_p_inoc_scaffold_173_curated_16
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15902..16903
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6D061
Uncharacterized protein {ECO:0000313|EMBL:KIN90200.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
hypothetical protein
scnpilot_p_inoc_scaffold_173_curated_17
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17151..18359)
DNA (1209bp) protein (403aa)
Cobalamin synthesis protein P47K n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYS9_DYAFD
cobalamin synthesis protein P47K
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:ACT93434.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_173_curated_18
Carnobacterium sp. AT7, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18641..18877
DNA (237bp) protein (79aa)
Acyl carrier protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U9Q3_9LACT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=333990 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. AT7.;"
acpP; acyl carrier protein
scnpilot_p_inoc_scaffold_173_curated_19
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19174..19755
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG37_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH52862.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_173_curated_20
unknown

Not on your lists

comp(19721..19888)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_173_curated_21
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20348..21361
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000369FB58
Beta-lactamase {ECO:0000313|EMBL:KEQ25849.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
beta-lactamase
scnpilot_p_inoc_scaffold_173_curated_22
unknown

Not on your lists

comp(21432..21737)
DNA (306bp) protein (102aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_173_curated_23
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21739..22314)
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor, ECF subfamily protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BIX8_ZUNPS
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma-70 factor, ECF subfamily protein {ECO:0000313|EMBL:ADF53611.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_p_inoc_scaffold_173_curated_24
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22298..22627)
DNA (330bp) protein (110aa)
Membrane protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BIX7_ZUNPS
hypothetical protein
Membrane protein {ECO:0000313|EMBL:ADF53610.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_p_inoc_scaffold_173_curated_25
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22651..23736)
DNA (1086bp) protein (362aa)
Beta-lactamase n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UIK6_9FLAO
Peptidase S12 family protein {ECO:0000313|EMBL:GAO43038.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
beta-lactamase
scnpilot_p_inoc_scaffold_173_curated_26
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23847..24374
DNA (528bp) protein (176aa)
Appr-1-p processing domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KXF3_HALH1
Appr-1-p processing protein
Appr-1-p processing domain protein {ECO:0000313|EMBL:AEE49361.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_173_curated_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24803..25477
DNA (675bp) protein (225aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRG5_NIAKG
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEW01096.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_173_curated_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25474..26739
DNA (1266bp) protein (422aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRG4_NIAKG
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:AEW01095.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_173_curated_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26811..28184
DNA (1374bp) protein (458aa)
Outer membrane efflux protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRG3_NIAKG
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AEW01094.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_173_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28191..31331
DNA (3141bp) protein (1047aa)
Acriflavin resistance protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRG2_NIAKG
Acriflavin resistance protein {ECO:0000313|EMBL:AEW01093.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
acriflavin resistance protein
Displaying items 1-30 of 170 in total

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