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scnpilot_p_inoc_scaffold_270_curated

Search features with annotation key words

Displaying items 31-60 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_270_curated_31
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36307..36708)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6ED81_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM36649.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein
scnpilot_p_inoc_scaffold_270_curated_32
unknown

Not on your lists

36887..37141
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_270_curated_33
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

37156..37986
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ER42_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI52083.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_270_curated_34
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38063..38404
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037E2907
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ31002.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
scnpilot_p_inoc_scaffold_270_curated_35
unknown

Not on your lists

38558..38650
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_270_curated_36
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

38755..39039
DNA (285bp) protein (95aa)
ArsR family transcriptional regulator n=1 Tax=Spirosoma spitsbergense RepID=UPI00036F415F
transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADB42699.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_270_curated_37
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

39040..39651
DNA (612bp) protein (204aa)
Heavy metal transport/detoxification protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QV66_SPILD
Heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ADB42698.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_270_curated_38
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39874..40611
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036040BA
Ankyrin {ECO:0000313|EMBL:EYR70160.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
Ankyrin
scnpilot_p_inoc_scaffold_270_curated_39
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40890..41576)
DNA (687bp) protein (229aa)
thiol:disulfide interchange protein n=1 Tax=Nafulsella turpanensis RepID=UPI000346C35E
Thiol:disulfide interchange protein {ECO:0000313|EMBL:KGO08680.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
thiol:disulfide interchange protein
scnpilot_p_inoc_scaffold_270_curated_40
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(41573..41938)
DNA (366bp) protein (122aa)
heavy-metal transporting P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Uncharacterized protein {ECO:0000313|EMBL:AII54458.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
copper chaperone id=12556458 bin=CNBR_ACIDO species=Nafulsella turpanensis genus=Nafulsella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
scnpilot_p_inoc_scaffold_270_curated_41
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41958..44351)
DNA (2394bp) protein (798aa)
Copper/silver-translocating P-type ATPase n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z802_BELBD
Copper-transporting ATPase {ECO:0000313|EMBL:KGO08683.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
copper/silver-translocating P-type ATPase
scnpilot_p_inoc_scaffold_270_curated_42
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44752..45114)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G5R3_ECHVK
Uncharacterized protein {ECO:0000313|EMBL:KGO08685.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
scnpilot_p_inoc_scaffold_270_curated_43
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45232..45936)
DNA (705bp) protein (235aa)
protein-tyrosine-phosphatase; K03741 arsenate reductase [EC:1.20.4.1]
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003765DEB
Probable arsenate reductase {ECO:0000313|EMBL:EDM79300.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
scnpilot_p_inoc_scaffold_270_curated_44
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

46053..46385
DNA (333bp) protein (111aa)
ArsR family transcriptional regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI00035E707B
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACT92160.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_270_curated_45
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

46442..47014
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036CE7B5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93157.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_270_curated_46
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

47028..47480
DNA (453bp) protein (151aa)
amino-acid N-acetyltransferase (EC:2.3.1.1)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000360B52F
Amino acid acetyltransferase {ECO:0000313|EMBL:AKD53863.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_p_inoc_scaffold_270_curated_47
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

47477..48511
DNA (1035bp) protein (345aa)
arsenic resistance protein ArsB n=1 Tax=Dyadobacter beijingensis RepID=UPI00036D31A7
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
Arsenical-resistance protein {ECO:0000313|EMBL:ACT92101.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_270_curated_48
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

48523..49299
DNA (777bp) protein (259aa)
ser/threonine protein phosphatase n=1 Tax=Dyadobacter beijingensis RepID=UPI00035D68C3
Putative phosphoesterase {ECO:0000313|EMBL:EDM34543.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
metallophosphoesterase
scnpilot_p_inoc_scaffold_270_curated_49
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

49296..50045
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003741861
Serine/threonine protein phosphatase {ECO:0000313|EMBL:KGO95072.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
metallophosphoesterase
scnpilot_p_inoc_scaffold_270_curated_50
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

50057..50389
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003622B90
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93163.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_270_curated_51
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

50438..51538
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003778328
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_270_curated_52
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

51728..52357
DNA (630bp) protein (210aa)
Resolvase domain-containing protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F1C1_EMTOG
Uncharacterized protein {ECO:0000313|EMBL:CEN53048.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
Resolvase domain-containing protein
scnpilot_p_inoc_scaffold_270_curated_53
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52425..53417
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034D3D02
Uncharacterized protein {ECO:0000313|EMBL:ETK05515.1}; TaxID=1410950 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 5.;"
scnpilot_p_inoc_scaffold_270_curated_54
unknown

Not on your lists

comp(53514..54833)
DNA (1320bp) protein (440aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_270_curated_55
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(54921..55745)
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZT9_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93567.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_270_curated_56
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(55759..56235)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZT7_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93565.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_270_curated_57
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(56251..59481)
DNA (3231bp) protein (1077aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
DNA polymerase III subunit alpha; K14162 error-prone DNA polymerase [EC:2.7.7.7]
DNA polymerase III, alpha subunit n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZT6_DYAFD
scnpilot_p_inoc_scaffold_270_curated_58
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(59497..60996)
DNA (1500bp) protein (500aa)
Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZT5_DYAFD
DNA repair nucleotidyltransferase/DNA polymerase; K14161 protein ImuB
Nucleotidyltransferase/DNA polymerase involved in DNA repair {ECO:0000313|EMBL:ACT93563.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_270_curated_59
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(61011..61748)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZT4_DYAFD
hypothetical protein; K14160 protein ImuA
Uncharacterized protein {ECO:0000313|EMBL:ACT93562.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_270_curated_60
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

61818..62657
DNA (840bp) protein (280aa)
Transcriptional regulator, XRE family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZT3_DYAFD
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACT93561.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 31-60 of 122 in total

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