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scnpilot_p_inoc_scaffold_3_curated

Search features with annotation key words

Displaying items 1-30 of 732 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3_curated_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1..780
DNA (780bp) protein (260aa)
tyrosine recombinase n=1 Tax=Dyadobacter beijingensis RepID=UPI000382B302
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACT96417.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_2
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1217..2164
DNA (948bp) protein (316aa)
aldo/keto reductase (EC:1.1.1.-)
Aldo/keto reductase {ECO:0000313|EMBL:ACL69154.1}; EC=1.1.1.- {ECO:0000313|EMBL:ACL69154.1};; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
Aldo/keto reductase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D1S7_HALOH
scnpilot_p_inoc_scaffold_3_curated_3
unknown

Not on your lists

2154..2738
DNA (585bp) protein (195aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3_curated_4
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2735..3553
DNA (819bp) protein (273aa)
SIR2 family protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS75_CLOSA
Uncharacterized protein {ECO:0000313|EMBL:KFF99570.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
SIR2 family protein
scnpilot_p_inoc_scaffold_3_curated_5
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


3556..4107
DNA (552bp) protein (184aa)
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase n=5 Tax=Treponema denticola RepID=M2ANT4_TREDN
HAM1 protein
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase {ECO:0000313|EMBL:EMB24966.1}; TaxID=999434 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola OTK.;"
scnpilot_p_inoc_scaffold_3_curated_6
unknown

Not on your lists

4104..5156
DNA (1053bp) protein (351aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3_curated_7
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5594..6793)
DNA (1200bp) protein (400aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
adenylosuccinate synthetase; K01939 adenylosuccinate synthase [EC:6.3.4.4]
Adenylosuccinate synthetase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KUE2_HALH1
scnpilot_p_inoc_scaffold_3_curated_8
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6795..7970)
DNA (1176bp) protein (392aa)
Nucleoside 2-deoxyribosyltransferase family protein n=1 Tax=Pseudomonas syringae pv. lachrymans str. M301315 RepID=F3EIW8_PSESL
Uncharacterized protein {ECO:0000313|EMBL:KJF43593.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
nucleoside 2-deoxyribosyltransferase
scnpilot_p_inoc_scaffold_3_curated_9
unknown

Not on your lists

comp(7967..8326)
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3_curated_10
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8356..8613)
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF43591.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
scnpilot_p_inoc_scaffold_3_curated_11
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9653..10411
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C334_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ76886.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_3_curated_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10518..10787
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029A102C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92199.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_13
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10784..11107
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GUJ7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR95363.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3_curated_14
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11097..11465
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RVJ9_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ17063.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_3_curated_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11462..12160
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VT62_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96426.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_16
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12153..12677
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VT63_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96427.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_17
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12940..13599
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003617095
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96428.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_18
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13596..14441
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003818823
relaxase/mobilization nuclease family protein
Relaxase/mobilization nuclease family protein {ECO:0000313|EMBL:ADQ17067.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_3_curated_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14497..14970
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003770B35
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92559.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_20
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15134..16225)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PRA1_MURRD
Uncharacterized protein {ECO:0000313|EMBL:KIA91200.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3_curated_21
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16229..17020)
DNA (792bp) protein (264aa)
RNA polymerase n=1 Tax=Gillisia marina RepID=UPI000299FAC3
RNA polymerase {ECO:0000313|EMBL:KFC20754.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
sigma-70 family RNA polymerase sigma factor
scnpilot_p_inoc_scaffold_3_curated_22
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17200..17445
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VL97_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK58370.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3_curated_23
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17958..18317
DNA (360bp) protein (120aa)
DNA mismatch endonuclease Vsr; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Fis family transcriptional regulator n=1 Tax=Rudanella lutea RepID=UPI00037C204D
Vsr endonuclease {ECO:0000313|EMBL:GAO44136.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_p_inoc_scaffold_3_curated_24
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

18353..19930
DNA (1578bp) protein (526aa)
DNA methyltransferase n=1 Tax=Pedobacter agri RepID=UPI00029B428A
C-5 cytosine-specific DNA methylase
C-5 cytosine-specific DNA methylase {ECO:0000313|EMBL:AGR77632.1}; TaxID=1036172 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri 7h1h.;"
scnpilot_p_inoc_scaffold_3_curated_25
Pseudoalteromonas arctica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20021..21505
DNA (1485bp) protein (495aa)
ATP-binding protein n=1 Tax=Pseudoalteromonas arctica A 37-1-2 RepID=U1KGT0_9GAMM
ATP-binding protein {ECO:0000313|EMBL:ERG10760.1}; TaxID=1117313 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas arctica A 37-1-2.;"
ATP-binding protein
scnpilot_p_inoc_scaffold_3_curated_26
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21505..24492
DNA (2988bp) protein (996aa)
Endonuclease n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JQ22_STREN
Uncharacterized protein {ECO:0000313|EMBL:KJE46698.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
endonuclease
scnpilot_p_inoc_scaffold_3_curated_27
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24492..25451
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EQ11_CORAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJE46699.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
scnpilot_p_inoc_scaffold_3_curated_28
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25448..27808
DNA (2361bp) protein (787aa)
Putative uncharacterized protein n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CUF6_SHEPW
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
scnpilot_p_inoc_scaffold_3_curated_29
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28021..28383
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KYQ2_9FLAO
Strain DSM 12611 Contig21, whole genome shotgun sequence {ECO:0000313|EMBL:KIO50943.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
scnpilot_p_inoc_scaffold_3_curated_30
unknown

Not on your lists

28525..28713
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying items 1-30 of 732 in total

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