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scnpilot_p_inoc_scaffold_3_curated

Search features with annotation key words

Displaying items 571-600 of 732 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3_curated_571
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(690664..691521)
DNA (858bp) protein (286aa)
Ribonuclease III {ECO:0000313|EMBL:ACT95884.1}; EC=3.1.26.3 {ECO:0000313|EMBL:ACT95884.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
bactoprenol glucosyl transferase n=1 Tax=Dyadobacter beijingensis RepID=UPI00035D05DE
Ribonuclease III
scnpilot_p_inoc_scaffold_3_curated_572
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(691681..693339)
DNA (1659bp) protein (553aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000361EAEB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95883.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_573
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(693368..694798)
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00038205DB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95882.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_574
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(694791..695741)
DNA (951bp) protein (317aa)
Ribonuclease III {ECO:0000313|EMBL:ACT95881.1}; EC=3.1.26.3 {ECO:0000313|EMBL:ACT95881.1};; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Ribonuclease III n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4Q7_DYAFD
Ribonuclease III
scnpilot_p_inoc_scaffold_3_curated_575
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(695827..696750)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037C847E
putative permease
Putative permease {ECO:0000313|EMBL:AFL83087.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_p_inoc_scaffold_3_curated_576
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(696752..697834)
DNA (1083bp) protein (361aa)
Permease YjgP/YjgQ family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4Q6_DYAFD
YjgP/YjgQ family permease
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:ACT95880.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_577
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(697849..698511)
DNA (663bp) protein (221aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4Q5_DYAFD
DtxR family iron (metal) dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:ACT95879.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_578
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

698664..700016
DNA (1353bp) protein (451aa)
manganese transporter n=1 Tax=Dyadobacter beijingensis RepID=UPI00036FEBC8
NRAMP family Mn2+/Fe2+ transporter; K03322 manganese transport protein
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_579
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

700104..702050
DNA (1947bp) protein (649aa)
potassium transporter Kup n=1 Tax=Dyadobacter beijingensis RepID=UPI0003640068
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
K potassium transporter; K03549 KUP system potassium uptake protein
scnpilot_p_inoc_scaffold_3_curated_580
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

702141..703598
DNA (1458bp) protein (486aa)
ATPase (AAA+ superfamily)-like protein id=3372263 bin=GWF2_Bacteroidetes_40_13 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
ATPase -like protein; K07133
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_3_curated_581
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(703599..704117)
DNA (519bp) protein (173aa)
phosphoribosyltransferase; K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
phosphoribosyltransferase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036D00EB
Phosphoribosyltransferase {ECO:0000313|EMBL:ACT95876.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_582
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(704178..704882)
DNA (705bp) protein (235aa)
Amidotransferase, putative n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4Q1_DYAFD
amidotransferase
Amidotransferase, putative {ECO:0000313|EMBL:ACT95875.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_583
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(704891..705481)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036B8DF0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95874.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_584
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(705528..706913)
DNA (1386bp) protein (462aa)
Aldehyde Dehydrogenase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4P9_DYAFD
aldehyde dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACT95873.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_585
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(706990..707763)
DNA (774bp) protein (258aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4P8_DYAFD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT95872.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_586
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(707804..709180)
DNA (1377bp) protein (459aa)
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2]
glutamine synthetase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036EE9B7
Glutamine synthetase catalytic region {ECO:0000313|EMBL:ACT95871.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_587
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(709210..709833)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037B8A28
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95870.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_588
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(709837..710847)
DNA (1011bp) protein (337aa)
Na+-dependent transporter-like protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4P5_DYAFD
Na+-dependent transporter-like protein; K14347 solute carrier family 10 (sodium/bile acid cotransporter), member 7
Na+-dependent transporter-like protein {ECO:0000313|EMBL:ACT95869.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_589
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

711025..711852
DNA (828bp) protein (276aa)
Glycoside hydrolase family 16 n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4P4_DYAFD
glycoside hydrolase
Glycoside hydrolase family 16 {ECO:0000313|EMBL:ACT95868.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_590
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(711907..713064)
DNA (1158bp) protein (386aa)
Propeptide PepSY amd peptidase M4 n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4P3_DYAFD
propeptide PepSY amd peptidase M4
Propeptide PepSY amd peptidase M4 {ECO:0000313|EMBL:ACT95867.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_591
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(713208..713837)
DNA (630bp) protein (210aa)
carbonate dehydratase; K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
carbonic anhydrase n=1 Tax=Dyadobacter beijingensis RepID=UPI000362681B
scnpilot_p_inoc_scaffold_3_curated_592
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


713976..717458
DNA (3483bp) protein (1161aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
isoleucyl-tRNA synthase n=1 Tax=Dyadobacter beijingensis RepID=UPI00035D871A
scnpilot_p_inoc_scaffold_3_curated_593
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

717459..717902
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4P0_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95864.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_594
unknown

Not on your lists

717930..718082
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3_curated_595
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

718096..718875
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4N8_DYAFD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT95862.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_596
unknown

Not on your lists

718882..719259
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3_curated_597
unknown

Not on your lists

719363..719512
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3_curated_598
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(719528..720277)
DNA (750bp) protein (250aa)
Transcriptional regulator, DeoR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4N5_DYAFD
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ACT95859.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_599
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

720392..720943
DNA (552bp) protein (184aa)
5 nucleotidase deoxy cytosolic type C n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4N4_DYAFD
5' nucleotidase
5 nucleotidase deoxy cytosolic type C {ECO:0000313|EMBL:ACT95858.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_3_curated_600
unknown

Not on your lists

comp(721247..721465)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003815E33
Displaying items 571-600 of 732 in total

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