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scnpilot_p_inoc_scaffold_431_curated

Search features with annotation key words

Displaying items 31-60 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_431_curated_31
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30000..31658)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QC34_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39769.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_431_curated_32
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31627..32658)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00037BCFE0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ81483.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_431_curated_33
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32658..32981)
DNA (324bp) protein (108aa)
Transcriptional regulator, PadR-like family n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GEU2_9BACT
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:CCH52417.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
PadR family transcriptional regulator
scnpilot_p_inoc_scaffold_431_curated_34
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33322..33801)
DNA (480bp) protein (160aa)
Integrase catalytic region n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW29_DYAFD
Integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ACT93161.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_431_curated_35
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34140..34430)
DNA (291bp) protein (97aa)
Transposase IS3/IS911 family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZI1_DYAFD
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ACT91793.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_431_curated_36
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34512..36035)
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CJ53_ELIME
Sulfatase {ECO:0000313|EMBL:KFF18837.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
membrane-associated, metal-dependent hydrolase; K03760 phosphoethanolamine transferase
scnpilot_p_inoc_scaffold_431_curated_37
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36022..36906)
DNA (885bp) protein (295aa)
PAP2 family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FUY3_9SPHI
Phosphoesterase {ECO:0000313|EMBL:KFF21109.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein
scnpilot_p_inoc_scaffold_431_curated_38
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37069..39600)
DNA (2532bp) protein (844aa)
membrane protein n=1 Tax=Spirosoma luteum RepID=UPI00036BCEB8
Contig58, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76641.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
scnpilot_p_inoc_scaffold_431_curated_39
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

40059..40652
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SXY2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU29255.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
scnpilot_p_inoc_scaffold_431_curated_40
unknown

Not on your lists

40737..40976
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_431_curated_41
unknown

Not on your lists

comp(40973..41101)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_431_curated_42
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41085..41891)
DNA (807bp) protein (269aa)
Polysaccharide deacetylase id=2779334 bin=GWA2_Bacteroidetes_A19_40_15 species=Oscillatoria nigro-viridis genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
polysaccharide deacetylase
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_p_inoc_scaffold_431_curated_43
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41873..42610)
DNA (738bp) protein (246aa)
Glycosyl transferase family 2 id=2779340 bin=GWA2_Bacteroidetes_A19_40_15 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
family 2 glycosyl transferase
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_p_inoc_scaffold_431_curated_44
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42594..43754)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L6K8_HALH1
hypothetical protein
Tax=RBG_13_Bacteroidetes_42_15_curated
scnpilot_p_inoc_scaffold_431_curated_45
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(43777..46248)
DNA (2472bp) protein (824aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NEZ1_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EQB90521.1}; TaxID=1355388 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica 502.;"
TonB-dependent receptor
scnpilot_p_inoc_scaffold_431_curated_46
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

46415..47443
DNA (1029bp) protein (343aa)
Signal transduction histidine kinase LytS n=2 Tax=Elizabethkingia anophelis RepID=H0KUM7_9FLAO
Histidine kinase {ECO:0000313|EMBL:AKH95247.1}; TaxID=1352940 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica FMS-007.;"
signal transduction histidine kinase LytS
scnpilot_p_inoc_scaffold_431_curated_47
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

47447..48160
DNA (714bp) protein (238aa)
LytTR family transcriptional regulator n=1 Tax=Elizabethkingia anophelis R26 RepID=L8K979_9FLAO
LytTR family transcriptional regulator {ECO:0000313|EMBL:KGO08597.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
LytTR family transcriptional regulator
scnpilot_p_inoc_scaffold_431_curated_48
unknown

Not on your lists

comp(48105..48284)
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_431_curated_49
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

48422..48859
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000376BAB7
Contig34, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77458.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
DoxX family protein; K15977 putative oxidoreductase
scnpilot_p_inoc_scaffold_431_curated_50
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

49123..50202
DNA (1080bp) protein (360aa)
MscS Mechanosensitive ion channel n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7S9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:ETZ19574.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
mechanosensitive ion channel MscS
scnpilot_p_inoc_scaffold_431_curated_51
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(50206..50955)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RYV0_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ17347.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_431_curated_52
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(50977..51810)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036C73FB
ompa/motb domain protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ADQ17345.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_431_curated_53
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(51788..52267)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036C73FB
ompa/motb domain protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ADQ17345.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_431_curated_54
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

52370..54427
DNA (2058bp) protein (686aa)
Putative regulator of cell autolysis n=1 Tax=Psychroflexus gondwanensis ACAM 44 RepID=N1WI00_9FLAO
Histidine kinase {ECO:0000313|EMBL:KJJ37360.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
putative regulator of cell autolysis
scnpilot_p_inoc_scaffold_431_curated_55
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

54424..55185
DNA (762bp) protein (254aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EH00_RUNSL
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:AEI47028.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_431_curated_56
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

55340..55771
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI000302C7CD
Uncharacterized protein {ECO:0000313|EMBL:KIC94966.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_431_curated_57
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

55792..56496
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000362B14F
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
scnpilot_p_inoc_scaffold_431_curated_58
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

56650..57096
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000360DE5F
Uncharacterized protein {ECO:0000313|EMBL:KGO86631.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
hypothetical protein
scnpilot_p_inoc_scaffold_431_curated_59
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(57121..58353)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003606ACC
Na+/H+ antiporter NhaP {ECO:0000313|EMBL:EOR93296.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
nhaP; Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family
scnpilot_p_inoc_scaffold_431_curated_60
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58543..60279
DNA (1737bp) protein (579aa)
amino acid permease n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B7302D
Uncharacterized protein {ECO:0000313|EMBL:ETZ19573.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
amino acid permease
Displaying items 31-60 of 78 in total

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