ggKbase home page

scnpilot_p_inoc_scaffold_431_curated

Search features with annotation key words

Displaying items 61-78 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_431_curated_61
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(60276..61595)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CBT4_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ78676.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_431_curated_62
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(61714..62460)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E6B25
Na+/H+ antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_431_curated_63
unknown

Not on your lists

comp(62789..62917)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_431_curated_64
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(63539..63742)
DNA (204bp) protein (68aa)
Putative uncharacterized protein id=1883776 bin=GWE2_Bacteroidetes_32_14 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
scnpilot_p_inoc_scaffold_431_curated_65
unknown

Not on your lists

63866..64030
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_431_curated_66
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(64161..64649)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000377D00D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00897.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_431_curated_67
unknown

Not on your lists

comp(64770..65051)
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_431_curated_68
unknown

Not on your lists

comp(65063..65344)
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_431_curated_69
unknown

Not on your lists

comp(65698..65919)
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_431_curated_70
unknown

Not on your lists

65920..66087
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_431_curated_71
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

66500..67102
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000373DA2E
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCH51750.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
ECF subfamily RNA polymerase sigma-24 subunit
scnpilot_p_inoc_scaffold_431_curated_72
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

67252..68376
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI0003698E4A
FecR anti-FecI sigma factor
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACT93668.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_431_curated_73
Bacteroides sp. CAG:633, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

68565..72032
DNA (3468bp) protein (1156aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Bacteroides sp. CAG:633 RepID=R6FM60_9BACE
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDB10041.1}; TaxID=1262744 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:633.;"
TonB-dependent receptor
scnpilot_p_inoc_scaffold_431_curated_74
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

72054..73901
DNA (1848bp) protein (616aa)
SusD family protein n=2 Tax=Bacteroides RepID=B3CAP7_9BACE
SusD family protein {ECO:0000313|EMBL:EDV06476.1}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
RagB/SusD domain-containing protein
scnpilot_p_inoc_scaffold_431_curated_75
Bacteroides intestinalis CAG:564, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

73912..74634
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3CAP8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY87380.1}; TaxID=1263049 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:564.;"
hypothetical protein
scnpilot_p_inoc_scaffold_431_curated_76
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

74731..79401
DNA (4671bp) protein (1557aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3Y1Z7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHH01860.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
scnpilot_p_inoc_scaffold_431_curated_77
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

79885..80277
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2PTN1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKF54944.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
scnpilot_p_inoc_scaffold_431_curated_78
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

80605..81624
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037F4179
Fis family sigma-54 specific transcriptional regulator
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ACT92156.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 61-78 of 78 in total

View Taxonomy