ggKbase home page

scnpilot_p_inoc_scaffold_9_curated_2

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(1718..2467)

Top 3 Functional Annotations

Value Algorithm Source
Putative response regulatory protein ypdB n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJZ2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 235.0
  • Bit_score: 352
  • Evalue 2.50e-94
Putative response regulatory protein ypdB {ECO:0000313|EMBL:CCH54217.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 235.0
  • Bit_score: 352
  • Evalue 3.50e-94
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 232.0
  • Bit_score: 262
  • Evalue 1.10e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 750
ATGTGCTCTAAATCCTGGTATCCGACCATCCGCGATATGTCTACGAAGCCATATTCCTGCATCATTGTCGACGACAATGAGATCGACAGGCTGACTGTGCTGGCACATGCCCGGCGCTGTAAGACGCTGCAGATCGCTGGCATATTTCAGTCGGCTTCCGAAGCCCTGCTCTTTCTCCAAAACAGAAACGTGGACATTCTGCTGCTGGATATCGACATGCCCGAAGTGAATGGGCTTGAATTGCGACGCCGACTGATGCAAGTCCCGGCATGCATATTTATTACCTCCTATCCCGACTATGCGGCGGATAGCTTTGCGGTCGACGCCTTTGATTATCTGGTCAAACCCATTCATGCCGATCGATTTGCCCACACCATCACACGTCTGGAGCTTTTTTTTGAAATAAAAAATAAAGCTCGGTTGTTCGACCTGAGTCTGGGGGCCGAAACGATTTTTGTCAAGGACGGCCATCAGCAGATTAAGCTGAACCTTTATGAAATCGTCTACCTGGAAGGTTTAAGGGATTATACCCGTATAGTTACGTCCGAACGCCAGTACACCGTGCTGGCCTCCATCGGCAACCTGTTACAGCAAAGGCCCTTCCAATCCTTTTTGCGCGTTCACAGGAGCTATGCTGTACAGCGGCACTACATTGACCGTATCGATGCACACCATATTTACGCCCGGCAATTTATGTTGCCAGTGGGTCGTAGTTATCGCGCCGTGCTGGAATCGATAAGTGCCCGGTAA
PROTEIN sequence
Length: 250
MCSKSWYPTIRDMSTKPYSCIIVDDNEIDRLTVLAHARRCKTLQIAGIFQSASEALLFLQNRNVDILLLDIDMPEVNGLELRRRLMQVPACIFITSYPDYAADSFAVDAFDYLVKPIHADRFAHTITRLELFFEIKNKARLFDLSLGAETIFVKDGHQQIKLNLYEIVYLEGLRDYTRIVTSERQYTVLASIGNLLQQRPFQSFLRVHRSYAVQRHYIDRIDAHHIYARQFMLPVGRSYRAVLESISAR*