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scnpilot_p_inoc_scaffold_9_curated

Search features with annotation key words

Displaying items 1-30 of 528 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_9_curated_1
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3..1718)
DNA (1716bp) protein (572aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJZ1_9BACT
ATP-binding domain-containing protein
scnpilot_p_inoc_scaffold_9_curated_2
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1718..2467)
DNA (750bp) protein (250aa)
Putative response regulatory protein ypdB n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJZ2_9BACT
Putative response regulatory protein ypdB {ECO:0000313|EMBL:CCH54217.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
LytTR family two component transcriptional regulator
scnpilot_p_inoc_scaffold_9_curated_3
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2598..3443
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K6F7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG99710.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_9_curated_4
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3474..4091
DNA (618bp) protein (206aa)
Cupin 2, barrel n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K6F6_9BACT
cupin 2, barrel
Cupin 2, barrel {ECO:0000313|EMBL:CCG99709.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_9_curated_5
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4107..4721
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJZ4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH54219.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_9_curated_6
unknown

Not on your lists

4718..5053
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_9_curated_7
unknown

Not on your lists

5547..5825
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_9_curated_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5853..6503
DNA (651bp) protein (217aa)
Transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VU12_DYAFD
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACT94780.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_9
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6796..7068
DNA (273bp) protein (91aa)
Mobile element protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HBB1_BURVI
Uncharacterized protein {ECO:0000313|EMBL:AKD04940.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
transposase IS116/IS110/IS902 family protein
scnpilot_p_inoc_scaffold_9_curated_10
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7775..8281
DNA (507bp) protein (169aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVC6_DYAFD
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT96656.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_11
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8286..8927
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVC7_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96657.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_12
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10141..12468)
DNA (2328bp) protein (776aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036B5CE2
Uncharacterized protein {ECO:0000313|EMBL:EGK05708.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_p_inoc_scaffold_9_curated_13
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12543..13313)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037B8867
LuxR family transcriptional regulator
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_p_inoc_scaffold_9_curated_14
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13684..14592
DNA (909bp) protein (303aa)
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XUI2_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:ETZ23795.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_9_curated_15
unknown

Not on your lists

comp(14771..14887)
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_9_curated_16
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15407..16324
DNA (918bp) protein (306aa)
Esterase/lipase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2H9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ23796.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
alpha/beta hydrolase
scnpilot_p_inoc_scaffold_9_curated_17
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16434..17435)
DNA (1002bp) protein (334aa)
NADPH:quinone oxidoreductase n=1 Tax=Pedobacter agri RepID=UPI00029A4096
alcohol dehydrogenase zinc-binding domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_9_curated_18
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17519..18289)
DNA (771bp) protein (257aa)
short-chain dehydrogenase n=1 Tax=Pedobacter agri RepID=UPI000299FE25
Short-chain dehydrogenase {ECO:0000313|EMBL:KFC20283.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_9_curated_19
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18356..19090)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MTU6_9SPHI
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:GAE83524.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_9_curated_20
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19191..19775)
DNA (585bp) protein (195aa)
Transcriptional regulator, TetR family n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K623_9BACT
Transcriptional regulator {ECO:0000313|EMBL:KIC62736.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
transcriptional regulator, TetR family
scnpilot_p_inoc_scaffold_9_curated_21
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20200..20805
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YFU6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AKD57180.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
short-chain dehydrogenase
scnpilot_p_inoc_scaffold_9_curated_22
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21153..25214
DNA (4062bp) protein (1354aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037522B1
Signal transduction histidine kinase {ECO:0000313|EMBL:AHM59137.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
signal transduction histidine kinase
scnpilot_p_inoc_scaffold_9_curated_23
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25415..28636
DNA (3222bp) protein (1074aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000381E9E2
TonB-dependent receptor {ECO:0000313|EMBL:KJF43955.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_9_curated_24
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28681..30306
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036123EB
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:KJF43954.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
RagB/SusD domain-containing protein
scnpilot_p_inoc_scaffold_9_curated_25
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30317..31507
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035C7933
Uncharacterized protein {ECO:0000313|EMBL:KJF43953.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_9_curated_26
Caldicellulosiruptor lactoaceticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

31529..34414
DNA (2886bp) protein (962aa)
Type 3a cellulose-binding domain protein n=1 Tax=Caldicellulosiruptor lactoaceticus 6A RepID=G2PXX7_9FIRM
type 3a cellulose-binding domain-containing protein
Type 3a cellulose-binding domain protein {ECO:0000313|EMBL:AEM74844.1}; TaxID=632516 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor lactoaceticus 6A.;"
scnpilot_p_inoc_scaffold_9_curated_27
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34715..35926)
DNA (1212bp) protein (404aa)
Cobalamin synthesis protein P47K n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYS9_DYAFD
cobalamin synthesis protein P47K
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:ACT93434.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_28
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

36147..37586
DNA (1440bp) protein (480aa)
ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W189_DYAFD
multi-copper enzyme maturation ABC transporter permease-like protein; K01992 ABC-2 type transport system permease protein
ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein {ECO:0000313|EMBL:ACT91946.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_29
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

37583..38974
DNA (1392bp) protein (464aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W188_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91945.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

38955..39662
DNA (708bp) protein (236aa)
ABC transporter related n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W187_DYAFD
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ACT91944.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 1-30 of 528 in total

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