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scnpilot_p_inoc_scaffold_9_curated

Search features with annotation key words

Displaying items 31-60 of 528 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_9_curated_31
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(39908..40711)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037DE72C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH01367.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_9_curated_32
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

40778..41155
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036AAFC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93462.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_33
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

41294..43435
DNA (2142bp) protein (714aa)
ferrichrome-iron receptor n=1 Tax=Dyadobacter beijingensis RepID=UPI000381D621
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ACT93461.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
scnpilot_p_inoc_scaffold_9_curated_34
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

43458..44579
DNA (1122bp) protein (374aa)
PepSY-associated TM helix domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYV5_DYAFD
PepSY-associated TM helix domain-containing protein
PepSY-associated TM helix domain protein {ECO:0000313|EMBL:ACT93460.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_35
unknown

Not on your lists

comp(44778..45119)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000375F33D
scnpilot_p_inoc_scaffold_9_curated_36
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(45143..46051)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBY6_SPILD
Uncharacterized protein {ECO:0000313|EMBL:BAO76394.1}; TaxID=754409 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella sp. PG-2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_9_curated_37
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(46055..49177)
DNA (3123bp) protein (1041aa)
Acriflavin resistance protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBY3_SPILD
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ADB39718.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_9_curated_38
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(49180..50301)
DNA (1122bp) protein (374aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBY4_SPILD
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADB39719.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_9_curated_39
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(50311..51651)
DNA (1341bp) protein (447aa)
Outer membrane efflux protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBY5_SPILD
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ADB39720.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_9_curated_40
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

51994..52923
DNA (930bp) protein (310aa)
histidine kinase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6568B
Putative signal transduction histidine kinase {ECO:0000313|EMBL:EHQ26301.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
signal transduction histidine kinase LytS
scnpilot_p_inoc_scaffold_9_curated_41
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

52920..53684
DNA (765bp) protein (255aa)
LytTR family transcriptional regulator n=1 Tax=Cytophagales str. B6 RepID=UPI0003B42C1E
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:EHQ26300.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
LytTR family two component transcriptional regulator
scnpilot_p_inoc_scaffold_9_curated_42
unknown

Not on your lists

54263..54565
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_9_curated_43
unknown

Not on your lists

55076..55303
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_9_curated_44
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(55467..56516)
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1L6_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78610.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_9_curated_45
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(56558..56956)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B70823
Uncharacterized protein {ECO:0000313|EMBL:EJL71609.1}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein
scnpilot_p_inoc_scaffold_9_curated_46
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(57269..58135)
DNA (867bp) protein (289aa)
C-5 sterol desaturase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6C1BA
Fatty acid hydroxylase {ECO:0000313|EMBL:EHQ25138.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
sterol desaturase
scnpilot_p_inoc_scaffold_9_curated_47
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(58248..59024)
DNA (777bp) protein (259aa)
LytTR family transcriptional regulator n=1 Tax=Cytophagales str. B6 RepID=UPI0003B64238
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:EHQ25141.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
LytTR family two component transcriptional regulator
scnpilot_p_inoc_scaffold_9_curated_48
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59021..60043)
DNA (1023bp) protein (341aa)
Putative regulator of cell autolysis n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T0Z6_9FLAO
Putative regulator of cell autolysis {ECO:0000313|EMBL:EJL71607.1}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
signal transduction histidine kinase LytS
scnpilot_p_inoc_scaffold_9_curated_49
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(60431..61651)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GCW8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH51742.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
protein of unknown function DUF1501
scnpilot_p_inoc_scaffold_9_curated_50
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(61726..63165)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GCW7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH51741.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_9_curated_51
unknown

Not on your lists

63218..63364
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_9_curated_52
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

63719..64645
DNA (927bp) protein (309aa)
Transcriptional regulator, AraC family n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GP57_9SPHI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EOR93617.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
helix-turn-helix domain-containing protein
scnpilot_p_inoc_scaffold_9_curated_53
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

64732..65472
DNA (741bp) protein (247aa)
short-chain dehydrogenase/reductase sdr; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTH1_LEAB4
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADQ15985.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_9_curated_54
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

65503..66255
DNA (753bp) protein (251aa)
short-chain dehydrogenase/reductase sdr; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTH3_LEAB4
Short-chain dehydrogenase {ECO:0000313|EMBL:KIC94429.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_p_inoc_scaffold_9_curated_55
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(66334..67548)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037A2770
histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_9_curated_56
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

68018..68467
DNA (450bp) protein (150aa)
Heat shock protein Hsp20 n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2C0_DYAFD
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:ACT92093.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_57
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

68568..68801
DNA (234bp) protein (78aa)
Transposase, IS4 family n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RSY7_LEAB4
transposase, is4 family
Transposase, IS4 family {ECO:0000313|EMBL:ADQ18679.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_9_curated_58
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

68906..69835
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI0003733980
Contig_22, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21140.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
hypothetical protein
scnpilot_p_inoc_scaffold_9_curated_59
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

69846..70760
DNA (915bp) protein (305aa)
Transcriptional regulator, AraC family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8E4_9SPHI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EHQ25862.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_9_curated_60
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(70918..71484)
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZM9_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93507.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 31-60 of 528 in total

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