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scnpilot_p_inoc_scaffold_9_curated

Search features with annotation key words

Displaying items 91-120 of 528 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_9_curated_91
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(106248..106817)
DNA (570bp) protein (190aa)
methionine-R-sulfoxide reductase; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVP8_DYAFD
scnpilot_p_inoc_scaffold_9_curated_92
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(106914..107642)
DNA (729bp) protein (243aa)
LmbE family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVP9_DYAFD
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:ACT91355.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_93
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(107656..108699)
DNA (1044bp) protein (348aa)
peptidase M23 n=1 Tax=Dyadobacter beijingensis RepID=UPI00037DC321
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ACT91356.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_94
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(108807..109769)
DNA (963bp) protein (321aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVQ1_DYAFD
Thioredoxin reductase {ECO:0000313|EMBL:ACT91357.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_95
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(109945..111864)
DNA (1920bp) protein (640aa)
OmpA/MotB domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVQ2_DYAFD
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ACT91358.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_96
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(111864..112445)
DNA (582bp) protein (194aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVQ3_DYAFD
hypothetical protein
scnpilot_p_inoc_scaffold_9_curated_97
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

112619..113986
DNA (1368bp) protein (456aa)
tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-]
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
tRNA modification GTPase MnmE n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVQ4_DYAFD
scnpilot_p_inoc_scaffold_9_curated_98
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

114399..115370
DNA (972bp) protein (324aa)
Fic/DOC family protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FVK8_ECHVK
Fic/DOC family protein
Fic/DOC family protein {ECO:0000313|EMBL:AGA76700.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_p_inoc_scaffold_9_curated_99
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(115903..116424)
DNA (522bp) protein (174aa)
alcohol dehydrogenase zinc-binding domain-containing protein; K00344 NADPH2:quinone reductase [EC:1.6.5.5]
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSX4_DYAFD
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ACT94619.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_100
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

116517..117104
DNA (588bp) protein (196aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YIW6_9SPHI
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EHQ27661.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
putative Crp/Fnr family transcriptional regulator
scnpilot_p_inoc_scaffold_9_curated_101
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(117118..117489)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036DE080
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH00580.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_9_curated_102
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(117517..117939)
DNA (423bp) protein (141aa)
Methyltransferase type 11 n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW36_DYAFD
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACT93168.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_9_curated_103
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

118447..120276
DNA (1830bp) protein (610aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003770335
PAS {ECO:0000313|EMBL:EAY25215.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
PAS/PAC sensor hybrid histidine kinase
scnpilot_p_inoc_scaffold_9_curated_104
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(120359..120814)
DNA (456bp) protein (152aa)
transporter n=1 Tax=Dyadobacter beijingensis RepID=UPI000360F3C4
Transporter {ECO:0000313|EMBL:KIC91151.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein; K07112
scnpilot_p_inoc_scaffold_9_curated_105
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(120904..121467)
DNA (564bp) protein (188aa)
YeeE/YedE family protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0PTG9_ELIME
Uncharacterized protein {ECO:0000313|EMBL:AJW63183.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
hypothetical protein; K07112
scnpilot_p_inoc_scaffold_9_curated_106
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(121513..122934)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2QH97_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKF54117.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
Zn-dependent hydrolase
scnpilot_p_inoc_scaffold_9_curated_107
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(123024..123824)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036BBC59
Permease {ECO:0000313|EMBL:KIA96583.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein; K07090
scnpilot_p_inoc_scaffold_9_curated_108
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(123959..124570)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036B07D1
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:EHQ29121.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_p_inoc_scaffold_9_curated_109
unknown

Not on your lists

comp(124672..125124)
DNA (453bp) protein (151aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_9_curated_110
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

125540..127249
DNA (1710bp) protein (570aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
Alpha-amylase family protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JJP3_9BACT
alpha amylase
scnpilot_p_inoc_scaffold_9_curated_111
unknown

Not on your lists

127573..127839
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_9_curated_112
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

128122..128460
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI0003654038
Uncharacterized protein {ECO:0000313|EMBL:ESU25294.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
scnpilot_p_inoc_scaffold_9_curated_113
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

128499..129002
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JQ99_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR71131.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_9_curated_114
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

129048..129926
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QFD6_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36613.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_9_curated_115
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

130038..130913
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y830_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ31052.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_p_inoc_scaffold_9_curated_116
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

130960..131709
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000365E8C5
dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AFD07957.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_9_curated_117
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

131687..132838
DNA (1152bp) protein (384aa)
Secretion protein HlyD family protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LNB7_9BACT
Secretion protein HlyD family protein {ECO:0000313|EMBL:EJF10933.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
secretion protein HlyD family protein
scnpilot_p_inoc_scaffold_9_curated_118
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

132835..133959
DNA (1125bp) protein (375aa)
ABC transporter n=1 Tax=Cytophagales str. B6 RepID=UPI0003B45355
hypothetical protein; K09808 lipoprotein-releasing system permease protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_9_curated_119
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

134094..134768
DNA (675bp) protein (225aa)
ATP-binding protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B74495
phosphonate-transporting ATPase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_9_curated_120
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

134822..137365
DNA (2544bp) protein (848aa)
Magnesium-translocating P-type ATPase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F180_EMTOG
magnesium-translocating P-type ATPase
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:AFK05683.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
Displaying items 91-120 of 528 in total

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