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scnpilot_p_inoc_scaffold_9_curated_10

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 7775..8281

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVC6_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 169.0
  • Bit_score: 260
  • Evalue 8.80e-67
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 169.0
  • Bit_score: 260
  • Evalue 2.80e-67
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT96656.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 169.0
  • Bit_score: 260
  • Evalue 1.20e-66

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 507
ATGTCGCTTATTAGAGATGCCAACCAATTTTTGAATGTAGTTGATGCCCACAAGGGGATTATCTACAAGGTTGCCAACGCGTATTGTCGGGACGGGGAAAGTCGAAAGGATCTGATTCAGGAAATTACGTTGCAGCTTTGGCTAGCCTTTCCAAAGTACGACCAACAGTTCAAGTTAACCACCTGGATGTACCGTATAGCCCTGAACGTATCGATATCCTTTTTTCGCAAACAGATTACCCGGCAGAAAATCAGCCATCCGCTGACCGAAGAAATTCTCACAATGATGACCGACGAGCAGTCGGATGTGGATTCAGACTTCATACTACTTCACAAGTTAATCAGGCAACTGAAAGAATTTGACAGGGCGCTGATGCTGCTCTATCTGGAAGGCCGTAGCCACTCGGAGATAGCAGATATACTTGGGATCACCGCTTCCAATGTCTCAACTAAGGTGGGAAGGATCAAAGGACAACTACGGGAAAAATTCACATCATTAAAATCTTAA
PROTEIN sequence
Length: 169
MSLIRDANQFLNVVDAHKGIIYKVANAYCRDGESRKDLIQEITLQLWLAFPKYDQQFKLTTWMYRIALNVSISFFRKQITRQKISHPLTEEILTMMTDEQSDVDSDFILLHKLIRQLKEFDRALMLLYLEGRSHSEIADILGITASNVSTKVGRIKGQLREKFTSLKS*