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scnpilot_p_inoc_scaffold_9_curated_62

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 72687..73343

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035E120C similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 219.0
  • Bit_score: 219
  • Evalue 3.80e-54
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 214.0
  • Bit_score: 217
  • Evalue 4.50e-54
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB37268.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 214.0
  • Bit_score: 217
  • Evalue 2.00e-53

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 657
ATGACTTTACCCATCACAGACGACTCCGATGACTTCGTTCGGGTTTTTCAGACAGAATCTTCCCGAAGCGATAAGCCGGCGATCGAAACGGATGACGAGCGATTGCTCCGCGAGACGTTCCGTGAAGATCCCAGGCTGGGCTGCTCGCTACTTTTCAGAAGGTACTATCTGACACTCTGCAACCACGCCGCGCGCTTCGTTCATTCGCGCGAGACGGCGGAAGACATTGTGTCGGACCTGTTCGAGAGCTTCTGGGAGCAAGGCCTTTTCGAACAGCCGATCCACTCGTACCGCTCGTATCTTTACACTGCGGTGCGGCATCGTGCGTATAACTATCTCCGTTGGAAGATACGGCCCACCGACCCGCTTGAATCCATTCGTTCCGCACCGGTAGCACATACGATTGCCCCGGACGACGCCATGCAATACACCGAGCTTTATTTGAAAGTAGAAAGCATCATCCAGGAGTTGTCGCCTCAATGTCGCCGGGCCTACCTGCTCAAACGGGTGGAGGGTAAAAAATACGAGGAGATTGCGGAGGAATTGCAAGTCACCACAAAGGCTGTCGAGGGGCTGGTTGGCAGGGCGCTTGCCCGCTTGCGCACGGGCCTGAAAGAAAGCTGGTTCCTTGCAACGATGTACTTCCTGATTCCCTGA
PROTEIN sequence
Length: 219
MTLPITDDSDDFVRVFQTESSRSDKPAIETDDERLLRETFREDPRLGCSLLFRRYYLTLCNHAARFVHSRETAEDIVSDLFESFWEQGLFEQPIHSYRSYLYTAVRHRAYNYLRWKIRPTDPLESIRSAPVAHTIAPDDAMQYTELYLKVESIIQELSPQCRRAYLLKRVEGKKYEEIAEELQVTTKAVEGLVGRALARLRTGLKESWFLATMYFLIP*