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scnpilot_p_inoc_scaffold_415_curated_24

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(23678..24364)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06175 tRNA pseudouridine65 synthase [EC:5.4.99.26] similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 225.0
  • Bit_score: 355
  • Evalue 1.10e-95
pseudouridylate synthase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036FEF81 similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 226.0
  • Bit_score: 371
  • Evalue 4.80e-100
Pseudouridine synthase {ECO:0000313|EMBL:ACT91347.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 225.0
  • Bit_score: 355
  • Evalue 5.00e-95

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 687
ATGGACCCCTTAGAAATTTTATTTCAGTGCGAGCGCCTGGTTGCTATCAATAAGCCCAATGGTCTGCTCGTGCACCGCTCGCCGATCGCGAGTGACGCGGATGTATTTGCCGTGCAGCTCCTGCGTGACCAGCTGGGCCGTAAGGTGTATCCGGTCCACCGCCTCGACCGCAAGACCTCCGGCGTGCTGCTGTTCGCCCTGGACGAAGCCACCAACAGTGAAATGCAGCGGCAATTCATGAATGGGGAAGTTGACAAAACCTACCACGCCATTGTAAGGGGCTACACGCCCGATTCCAGCGAGATCGACTATCCCCTGAAACGCGATGACGGCGTAACACAGGACGCCCTCACTTACTTCAAAACCTTAATGCGCACCGAAGTACCATTCGCTATCGGAAAGCATCCCACCTCCCGCTACTCCTTAGTTGAACTCAACCCCGCCACAGGCCGCATGCACCAGCTTCGCAAGCATATGGCTCATATCATGCACCCGATCATCGGCGACCGCCCGCACGGCTGCAACAAGCAAAACCGGTTTTTCAAGAAGCACCTGAATTTGACACAGATGATGCTACACGCGTTGTCACTGAAATTTGTACATCCATCTACGAATAAATCTGTATGTATTACAGCTCCAAATCCGCAAGAATTTTCTAGAATTCTTGAAGTACTTCTATTTAAATAG
PROTEIN sequence
Length: 229
MDPLEILFQCERLVAINKPNGLLVHRSPIASDADVFAVQLLRDQLGRKVYPVHRLDRKTSGVLLFALDEATNSEMQRQFMNGEVDKTYHAIVRGYTPDSSEIDYPLKRDDGVTQDALTYFKTLMRTEVPFAIGKHPTSRYSLVELNPATGRMHQLRKHMAHIMHPIIGDRPHGCNKQNRFFKKHLNLTQMMLHALSLKFVHPSTNKSVCITAPNPQEFSRILEVLLFK*