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scnpilot_p_inoc_scaffold_415_curated

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_415_curated_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..596
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036BDC66
Conjugation system ATPase, TraG family protein {ECO:0000313|EMBL:KDS11441.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
conjugate transposon protein
scnpilot_p_inoc_scaffold_415_curated_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

609..1283
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036D60FC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92189.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_415_curated_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1329..1970
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037CDA52
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92190.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_415_curated_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1978..2607
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000363D71A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92191.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_415_curated_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2641..3711
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036166A6
Conjugal transfer protein TraJ {ECO:0000313|EMBL:KIC89821.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
TraJ family protein conjugative transposon
scnpilot_p_inoc_scaffold_415_curated_6
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3717..4334
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003789491
Strain DSM 12611 Contig03, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54339.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_415_curated_7
unknown

Not on your lists

4340..4735
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_415_curated_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4707..5990
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000364E22C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92195.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_415_curated_9
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6002..6832
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000368D8E0
Conjugative transposon protein TraN {ECO:0000313|EMBL:KIA82449.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
scnpilot_p_inoc_scaffold_415_curated_10
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6933..7679
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W393_DYAFD
Uncharacterized protein {ECO:0000313|EMBL:KIA82450.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
scnpilot_p_inoc_scaffold_415_curated_11
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7727..8638
DNA (912bp) protein (304aa)
DNA primase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJP2_ZUNPS
DNA primase
DNA primase {ECO:0000313|EMBL:ADF53740.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_p_inoc_scaffold_415_curated_12
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8665..9072
DNA (408bp) protein (136aa)
mobilization protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003659145
mobilisation protein
Mobilisation protein {ECO:0000313|EMBL:ADF53739.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_p_inoc_scaffold_415_curated_13
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9060..10337
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363C59E
relaxase/mobilization nuclease
Relaxase/mobilization nuclease {ECO:0000313|EMBL:AFD05330.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_415_curated_14
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10350..12335
DNA (1986bp) protein (662aa)
Type IV secretory pathway VirD4 components-like protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJN9_ZUNPS
type IV secretory pathway VirD4 components-like protein
Type IV secretory pathway VirD4 components-like protein {ECO:0000313|EMBL:ADF53737.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_p_inoc_scaffold_415_curated_15
unknown

Not on your lists

12426..12800
DNA (375bp) protein (125aa)
Transposase n=1 Tax=Riemerella anatipestifer RepID=Q9X3R8_RIEAN
scnpilot_p_inoc_scaffold_415_curated_16
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13447..14115
DNA (669bp) protein (223aa)
Galactoside O-acetyltransferase n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6XGV9_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KGO93362.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
hypothetical protein
scnpilot_p_inoc_scaffold_415_curated_17
unknown

Not on your lists

comp(14650..14787)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_415_curated_18
unknown

Not on your lists

14937..15248
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_415_curated_19
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15250..15621
DNA (372bp) protein (124aa)
IS66 Orf2 family protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IXH4_CYCMS
IS66 Orf2 family protein
IS66 Orf2 family protein {ECO:0000313|EMBL:AEL27163.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_p_inoc_scaffold_415_curated_20
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15735..16715
DNA (981bp) protein (327aa)
Transposase IS66 n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J4T8_CYCMS
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:AEL23897.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_p_inoc_scaffold_415_curated_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16987..20097)
DNA (3111bp) protein (1037aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUL2_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91321.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_415_curated_22
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20101..21597)
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037F04B5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91320.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_415_curated_23
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21649..23286)
DNA (1638bp) protein (546aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036DE7FE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91319.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_415_curated_24
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23678..24364)
DNA (687bp) protein (229aa)
pseudouridine synthase; K06175 tRNA pseudouridine65 synthase [EC:5.4.99.26]
pseudouridylate synthase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036FEF81
Pseudouridine synthase {ECO:0000313|EMBL:ACT91347.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_415_curated_25
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24472..25134)
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVP0_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91346.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_415_curated_26
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25272..26687)
DNA (1416bp) protein (472aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVN9_DYAFD
DEAD/DEAH box helicase
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ACT91345.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_415_curated_27
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26887..27252)
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVN8_DYAFD
hypothetical protein; K09959 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91344.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_415_curated_28
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27260..28813)
DNA (1554bp) protein (518aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde Dehydrogenase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUN4_DYAFD
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACT91343.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_415_curated_29
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29048..29974
DNA (927bp) protein (309aa)
AraC family transcriptional regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI00036CD2BF
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT91342.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_415_curated_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29996..30472)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037073B0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91341.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 1-30 of 91 in total

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