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scnpilot_p_inoc_scaffold_1648_curated_10

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(10622..11011)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional repressor rstR n=1 Tax=Vibrio fischeri (strain ATCC 700601 / ES114) RepID=Q5DZZ4_VIBF1 similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 85.0
  • Bit_score: 66
  • Evalue 1.90e-08
rstR; transcriptional repressor RstR similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 85.0
  • Bit_score: 66
  • Evalue 5.90e-09
Transcriptional repressor rstR {ECO:0000313|EMBL:AAW87652.1}; TaxID=312309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio.;" source="Vibrio fischeri (strain ATCC 700601 / ES114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 85.0
  • Bit_score: 66
  • Evalue 2.60e-08

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Taxonomy

Aliivibrio fischeri → Aliivibrio → Vibrionales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
TTGATATTTGTGAATACTAAAATTGCATCTAAAATCAAGCGCCTAAGGGAGGCGAACAATTTCACACAGGAATATGTGGCTGATGCTATCGGCATAGCACCCAATACTTACAGTTTGTTAGAGCGGGGTACTTCATCGATTCGTCTGGATCGACTGGAGAAGATCGCTAAATTTTACGGTGTCGATGTTTTCGAATTCTTGAATGACTCAAAAGCTTCTTCGCTATCATCCTTGCACATTGTAAAAGATGAATTAATGCTTGACGTGAGATGTGCAGATTGCCTTAATAGTGGGCCGATCGAAGAAGTGTTGGGGAAGATTTATGAGCAAAATCAGCTCATCTTGTCTGCTATCAGGCAACTGATTAATGACGCCGGACAGCGTCATTAG
PROTEIN sequence
Length: 130
LIFVNTKIASKIKRLREANNFTQEYVADAIGIAPNTYSLLERGTSSIRLDRLEKIAKFYGVDVFEFLNDSKASSLSSLHIVKDELMLDVRCADCLNSGPIEEVLGKIYEQNQLILSAIRQLINDAGQRH*