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scnpilot_p_inoc_scaffold_42_curated_29

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 34920..36293

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Dyadobacter beijingensis RepID=UPI00036816BC similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 457.0
  • Bit_score: 833
  • Evalue 8.90e-239
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 457.0
  • Bit_score: 824
  • Evalue 2.20e-236
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACT96804.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 457.0
  • Bit_score: 824
  • Evalue 9.90e-236

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1374
ATGCTCCTAATCGTAGACGACGACCTGGCCATCCGTACTTCCCTTCTGCTGCTTTTGAAAAAGGAGGGGTTTGAGGTGCGTGGGGCCGGGTCGCCGGAAGAAACTTTTGAAATACTGAAAGTGGCGACGCCCGAGCTGATATTGCTCGACCTCAATTTCTCGATTGAAACGTCGGGAAAGGAGGGAATGCATTTGTTGCAGCGGATCAAAAAGCACAATGCGGCCATTCCGGTGATCCTCATTACCGGCTGGGGGACGATCGACCTGGCGGTGCGCGGAATGAAAGAAGGCGCCGCCGACTTCGTGACCAAACCCTGGCAGAACGATTACCTGATCCAGTCGATCCGTACGATCCTGAACCTCGCCAAACCAGCACAGCAGGCAGGCAGCCGGCGGAAACTGGACCAGCAATACCATTTCGAAAACATCGTAGGAGAGGACCCGAAGCTGCTGGACATCCTGGAAACCATCGGACGCGTTGCTCCTACGGATGCGCCGGTACTCATTACGGGTGAAAGCGGTACGGGCAAGGAACTGATTGCCGAGGCCATTCACCTGAACAGCCGCCGGAAAGTTCGCCCGTTTGTAAAAGTCAATCTCGGCGGCATTTCCTCGACATTGTTCGAGAGCGAGCTGTTCGGGCATGTGCGCGGCGCATTCACCGACGCCAAAACCGACCGCATGGGCCGCTTTGAAATGGCCCACCGCGGAACAATTTTCCTGGACGAGATCGGCGAGCTGGATTTGTCGAGCCAGGTGAAACTCCTGCGCGTGTTGCAGGAACGCACGTTCGAGCCGCTGGGAAGTAGCAAAAGCCGGACCGTGGATGTACGGGTGATTTGCGCCACCAACCGGAACCTGGAAGATATGGTAGCCCAGGGCACATTCCGTGAAGACCTTTATTACCGCATTAACCTCATCACCGTGAAACTCCCCGCACTGCGGGAGCGGCCGGACGATATTCCGTTGCTGTCGGCGTTTTTTGCCGACAACCTCAAAACGATTTATAACAGGCCGGAACTTAAAATAGGGACGGCGGCATTGAAATGGCTCAAAACGTTGCCATTGCAGGGAAATATACGCCAGCTCAAAAACCTGGTGGAGCGGACGGTGCTGCTGGCAGGTAACAATGTGCTCGATATCGACGATTTTCAGCGCAACCTGACGGCGGGTAATGCAGCGTCAGCGCAAAAGCATGTGCCGGAGGTAGGCAGTGTCACGCTTGAAGAAATGGAGTATCAGATGATTGTCAGGGCCATGCAACACCATCAGAACAAGGTGAGCAAGGTCGCCCGCTCGCTGGGGATCACGCGCTTCGCATTGTACAGGCGGTTGGAAAAATTCGGCATTTCGTTCGATTCGGAGGAGGTATGA
PROTEIN sequence
Length: 458
MLLIVDDDLAIRTSLLLLLKKEGFEVRGAGSPEETFEILKVATPELILLDLNFSIETSGKEGMHLLQRIKKHNAAIPVILITGWGTIDLAVRGMKEGAADFVTKPWQNDYLIQSIRTILNLAKPAQQAGSRRKLDQQYHFENIVGEDPKLLDILETIGRVAPTDAPVLITGESGTGKELIAEAIHLNSRRKVRPFVKVNLGGISSTLFESELFGHVRGAFTDAKTDRMGRFEMAHRGTIFLDEIGELDLSSQVKLLRVLQERTFEPLGSSKSRTVDVRVICATNRNLEDMVAQGTFREDLYYRINLITVKLPALRERPDDIPLLSAFFADNLKTIYNRPELKIGTAALKWLKTLPLQGNIRQLKNLVERTVLLAGNNVLDIDDFQRNLTAGNAASAQKHVPEVGSVTLEEMEYQMIVRAMQHHQNKVSKVARSLGITRFALYRRLEKFGISFDSEEV*