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scnpilot_p_inoc_scaffold_42_curated_44

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(52265..54052)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 595.0
  • Bit_score: 1153
  • Evalue 0.0
GTP-binding protein LepA n=1 Tax=Dyadobacter beijingensis RepID=UPI00037FC5EF similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 595.0
  • Bit_score: 1156
  • Evalue 0.0
GTP-binding protein LepA; K03596 GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 595.0
  • Bit_score: 1153
  • Evalue 0.0

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1788
ATGAAGAAAATCCGTAATTTTTGCATTATTGCCCATATTGACCACGGGAAAAGTACCCTGGCGGACCGCCTGCTGGAATTCACCAAAACTGTATCGCAGCGCGAAATGCAGGCGCAATTGCTCGACAATATGGATCTGGAACGGGAACGCGGCATCACCATCAAGAGCCACGCGATCCAGATGAACTATGTTTATAAAGGAGAAGAATATATACTGAACCTGATCGACACCCCGGGCCACGTGGACTTTTCCTACGAGGTTTCCCGCTCGATCGCCGCCTGCGAAGGCGCATTGCTGCTCGTGGACGCTTCACAGGGAACCGAGGCGCAAACCATCTCCAACCTCTATCTGGCTATCAACCACGACCTGGTGATCATCCCTGTCCTGAACAAGATCGACCTTCCCGGCGCGATGCCCGAGGAGATCAAGGATGAAATGGTAGACCTGCTGGGCTGCGAACGTGCCGACATTATCCCGGCCAGCGGCAAGGAAGGTATCGGTATCGAGGACATCCTGAATGCCATTGTCGAGCGCATTCCTGCGCCGGTCGGCGATCCGGAAGGTCCGCTGCAGGCGCTGATCTTCGACTCTGTTTTCAATTCGTACCGCGGTATCGAGGTAATCTTCCGTGTGAAAAACGGCAGCATCAAAAAGGGTGATAAAGTAAAATTCATGGCGACCGGCAAGGAATATATTGCCGACGAAATCGGTACGCTCGGTTTGCAGCAGATACCCAAGCAAGTAGTGGAATGCGGCGACGTAGGTTACCTGATCTCGGGTATCAAAGTAGCCAAGGAAGTAAAGGTAGGCGACACATTTACGCATATCGACCGCCCCGCCAGCGAAGCGATCGTAGGGTTCTCGGAGGTAAAGCCGATGGTTTTCGCCGGTATTTATCCTGTTGACACCAGCGAGTTCGAAGAGCTTCGCGAGGCCATGGAAAAGCTTCAACTGAATGACGCCGCGCTGGTTTGGGAACCGGAAACTTCTGCGGCGCTGGGCTTCGGTTTCCGTTGCGGCTTCCTCGGTATGCTGCACATGGAGATCGTTCAGGAACGACTCGAACGCGAGTTCGACATGACGGTGATCACCACGGTGCCGTCGGTACAGTTCCGGGTGTTGACGACCAAAGACAAGCTCCTGAACATCAGCGCGCCGTCGGAAATGCCAGAGCCTAACCATATCAAATACATCGAGGAGCCGTATATCAATGCGCAGATCATCACCAAATCGGACTACATCGGCCCGATCCTGAACCTGTGTATGGACAAGCGGGGTATCCTTAAAAACCAGATTTACCTCACCGCCGAGCGCGTGGAACTTCAATTCCTCATTCCGCTGGCTGAGGTCGTATTCGACTTTTTTGATAAGCTCAAAACAATTTCCCGCGGCTATGCTTCGCTGGATTACGAACTGGCAGGTTACCAGGAGTCGGACATGGTGAAGCTCGACGTGATGCTGAATGGCGAGGCAGTGGATGCCTTGTCGGCCATCGTACACCGTTCGAAATCCTACGAATGGGGCAAGAAGCTTTGCGAAAAACTCCGCGAGCTGATCCCGCGGCAAATGTTCGAGATCGCGATCCAGGCGGCCATCGGTCAGAAGATCATCGCCCGCGAGACGGTGAAAGCGATGCGGAAAGACGTTTTGGCCAAATGTTACGGCGGTGATATTTCCCGCAAGCGCAAGCTCCTGGAAAAGCAGAAGAAAGGTAAGAAACGGATGCGTCAGGTAGGTAGCGTCGAAATTCCGCAGGAAGCATTTATGGCCGTTTTGAAGATCAACTAG
PROTEIN sequence
Length: 596
MKKIRNFCIIAHIDHGKSTLADRLLEFTKTVSQREMQAQLLDNMDLERERGITIKSHAIQMNYVYKGEEYILNLIDTPGHVDFSYEVSRSIAACEGALLLVDASQGTEAQTISNLYLAINHDLVIIPVLNKIDLPGAMPEEIKDEMVDLLGCERADIIPASGKEGIGIEDILNAIVERIPAPVGDPEGPLQALIFDSVFNSYRGIEVIFRVKNGSIKKGDKVKFMATGKEYIADEIGTLGLQQIPKQVVECGDVGYLISGIKVAKEVKVGDTFTHIDRPASEAIVGFSEVKPMVFAGIYPVDTSEFEELREAMEKLQLNDAALVWEPETSAALGFGFRCGFLGMLHMEIVQERLEREFDMTVITTVPSVQFRVLTTKDKLLNISAPSEMPEPNHIKYIEEPYINAQIITKSDYIGPILNLCMDKRGILKNQIYLTAERVELQFLIPLAEVVFDFFDKLKTISRGYASLDYELAGYQESDMVKLDVMLNGEAVDALSAIVHRSKSYEWGKKLCEKLRELIPRQMFEIAIQAAIGQKIIARETVKAMRKDVLAKCYGGDISRKRKLLEKQKKGKKRMRQVGSVEIPQEAFMAVLKIN*