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scnpilot_p_inoc_scaffold_42_curated_80

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(90926..91501)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Pedobacter sp. BAL39 RepID=A6EA47_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 35.1
  • Coverage: 168.0
  • Bit_score: 121
  • Evalue 9.50e-25
Uncharacterized protein {ECO:0000313|EMBL:KEO74231.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.8
  • Coverage: 173.0
  • Bit_score: 124
  • Evalue 1.20e-25
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 187.0
  • Bit_score: 112
  • Evalue 1.80e-22

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Taxonomy

Anditalea andensis → Anditalea → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 576
ATGCTGTTGCTTTCACAAAGCAACCCCCTCGCCTTTACGCACATTTACAGGCAGTATCAGGCGACCGTGCTTGCCTATGCCCAAAGAATTACCCGGTCCCGGCCAGTCGCAGAAGACATTACCCAGGATGTCTTCCTGACGATTTGGGAGCACCGCAGCACCATGTGTGGTATAAGGCATTTGAAAAAGTACCTGCTTACCATCTGCAAGCATAACGCGCTCGATTTTCTGGCCCGGCAGGCACTGGGCCAGAAAATAAGTAAGGAAGTAGCCTTTCACACGGAGCAATTCCATTGTGATACGGAAATCACCCTGCAGCGCCATGAATACCACGACTTGCTGCTTAGTGCCATAGACGGACTGCCGCCGAAGCGCAAACTGGTTTTTACCCTCTGCAAGATTGATGGTATCAGCTACGATCAAGTAGCCGAACAACTGGCCATCGCCCCGGGAACCATCAACGACCACATTGTAAAGGGGACGCGCTTTATCAAACGATATTTGAAAAACCTGATTTGCGCAGCACCTGGCAGAGCCGCACCTGTTTCTTCCAAAAATATCGGTGACAGCATATGA
PROTEIN sequence
Length: 192
MLLLSQSNPLAFTHIYRQYQATVLAYAQRITRSRPVAEDITQDVFLTIWEHRSTMCGIRHLKKYLLTICKHNALDFLARQALGQKISKEVAFHTEQFHCDTEITLQRHEYHDLLLSAIDGLPPKRKLVFTLCKIDGISYDQVAEQLAIAPGTINDHIVKGTRFIKRYLKNLICAAPGRAAPVSSKNIGDSI*