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scnpilot_p_inoc_scaffold_91_curated_3

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 1913..2143

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3C044 similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 72.0
  • Bit_score: 76
  • Evalue 1.80e-11
Uncharacterized protein {ECO:0000313|EMBL:ETZ20145.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 73.0
  • Bit_score: 83
  • Evalue 1.20e-13
Helix-turn-helix protein similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 72.0
  • Bit_score: 72
  • Evalue 8.30e-11

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Taxonomy

Pedobacter sp. V48 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 231
ATGCCCGAAAAAACAGATTTCGAAATTGCGGTGATAAATCAAGTGAGGAAAGTCCGAAAAGCTAAGGGCTATACTCAGGACGATCTCGCTATGTTTCTAAATTTGACCAGGGGGTTTATCGGACAAATTGAAAGTCCCAAATTTCCAAGTAAATACAATATTGAACATATTGGAATACTCGCCCGTGAAATGAACTGTTCTCCCAGGGACTTAATGCCTGAACAGGTATAG
PROTEIN sequence
Length: 77
MPEKTDFEIAVINQVRKVRKAKGYTQDDLAMFLNLTRGFIGQIESPKFPSKYNIEHIGILAREMNCSPRDLMPEQV*