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scnpilot_p_inoc_scaffold_91_curated

Search features with annotation key words

Displaying items 1-30 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_91_curated_1
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..983)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PRA1_MURRD
Uncharacterized protein {ECO:0000313|EMBL:KIA91200.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_91_curated_2
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(987..1787)
DNA (801bp) protein (267aa)
RNA polymerase n=1 Tax=Gillisia marina RepID=UPI000299FAC3
RNA polymerase {ECO:0000313|EMBL:KFC20754.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
sigma-70 family RNA polymerase sigma factor
scnpilot_p_inoc_scaffold_91_curated_3
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1913..2143
DNA (231bp) protein (77aa)
DNA-binding protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3C044
Uncharacterized protein {ECO:0000313|EMBL:ETZ20145.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
Helix-turn-helix protein
scnpilot_p_inoc_scaffold_91_curated_4
unknown

Not on your lists

2336..2464
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_91_curated_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2404..2559
DNA (156bp) protein (52aa)
Antirestriction ArdA family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VT66_DYAFD
Antirestriction ArdA family protein
Antirestriction ArdA family protein {ECO:0000313|EMBL:ACT96430.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_91_curated_6
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3324..5093
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHD2_IGNAJ
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:CEN43392.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_91_curated_7
unknown

Not on your lists

5184..5891
DNA (708bp) protein (236aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_91_curated_8
unknown

Not on your lists

5903..6034
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_91_curated_9
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6251..7723
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C9T2_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ81467.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_91_curated_10
unknown

Not on your lists

7891..8421
DNA (531bp) protein (177aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_91_curated_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9003..10319)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E6B25
Na+/H+ antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_91_curated_12
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10475..11896
DNA (1422bp) protein (474aa)
sodium:alanine symporter n=1 Tax=Dyadobacter beijingensis RepID=UPI000369EB27
amino acid carrier protein; K03310 alanine or glycine:cation symporter, AGCS family
Amino acid carrier protein {ECO:0000313|EMBL:AEI50414.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_91_curated_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11942..13297)
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000370B44F
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EEC97376.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
pyridine nucleotide-disulfide oxidoreductase
scnpilot_p_inoc_scaffold_91_curated_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13361..15673)
DNA (2313bp) protein (771aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000362BE01
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95321.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_91_curated_15
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15883..16542
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037123B1
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEI47306.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_91_curated_16
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16591..17598
DNA (1008bp) protein (336aa)
Anti-FecI sigma factor, FecR n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EJR4_RUNSL
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEI47305.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_91_curated_17
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17670..21143
DNA (3474bp) protein (1158aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5YN24_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:KKB59159.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
TonB-dependent transducer
scnpilot_p_inoc_scaffold_91_curated_18
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21165..22970
DNA (1806bp) protein (602aa)
SusD family protein n=1 Tax=Bacteroides sp. CAG:714 RepID=R6YM01_9BACE
SusD family protein {ECO:0000313|EMBL:CDD32469.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
RagB/SusD domain-containing protein
scnpilot_p_inoc_scaffold_91_curated_19
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23022..25271
DNA (2250bp) protein (750aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NM76_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ24820.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
scnpilot_p_inoc_scaffold_91_curated_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25335..27485)
DNA (2151bp) protein (717aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSL4_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92836.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_91_curated_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27517..28950)
DNA (1434bp) protein (478aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSL5_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92837.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_91_curated_22
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29108..31432)
DNA (2325bp) protein (775aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSL6_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92838.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_91_curated_23
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31451..32779)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037011CE
Uncharacterized protein {ECO:0000313|EMBL:KFC59480.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
MFS transporter, sugar porter family
scnpilot_p_inoc_scaffold_91_curated_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32901..34175)
DNA (1275bp) protein (425aa)
Transcriptional regulator/sugar kinase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTN6_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KIC93996.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
transcriptional regulator/sugar kinase
scnpilot_p_inoc_scaffold_91_curated_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34574..35890)
DNA (1317bp) protein (439aa)
Phosphoesterase {ECO:0000313|EMBL:KIC94000.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Phosphoesterase pa-phosphatase related protein id=3235750 bin=GWF2_Bacteroidetes_41_9 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
phosphoesterase PA-phosphatase related protein
scnpilot_p_inoc_scaffold_91_curated_26
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35909..39481)
DNA (3573bp) protein (1191aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380F9D2
RNA-binding protein {ECO:0000313|EMBL:KIC94001.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ASPIC/UnbV domain-containing protein
scnpilot_p_inoc_scaffold_91_curated_27
unknown

Not on your lists

comp(39426..39560)
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_91_curated_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39608..41476)
DNA (1869bp) protein (623aa)
Putative outer membrane protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EID7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC94002.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ragb/susd domain protein
scnpilot_p_inoc_scaffold_91_curated_29
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41488..44640)
DNA (3153bp) protein (1051aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EID8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM34664.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
TonB-dependent receptor
scnpilot_p_inoc_scaffold_91_curated_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(45152..45883)
DNA (732bp) protein (244aa)
Transcriptional regulator, GntR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSL7_DYAFD
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACT92839.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 1-30 of 192 in total

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