ggKbase home page

scnpilot_p_inoc_scaffold_140_curated_163

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(191352..192818)

Top 3 Functional Annotations

Value Algorithm Source
SusD family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VSG3_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 489.0
  • Bit_score: 464
  • Evalue 1.20e-127
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:KIA92366.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 487.0
  • Bit_score: 551
  • Evalue 1.30e-153
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 526.0
  • Bit_score: 209
  • Evalue 2.80e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1467
ATGATCATGAAAAACATATTCACTAAGTCACTATATGTATTGTCATTGGTTACAATGATGTCAGGTTGTAATGGAGCGCTGGAAGAGGAACCCAGAACATTTGTCAGCCCGGATGCTTATTTCAACGGCGGTTTTGATTCTTACGACCTGGCGGTCGTTGGAGTTTATCGCACGATCCGAAATACTTTGGGACATGGAGCCTGGCTGACTCGGGAAAGTTTCAGTGATATCATTGGCCCTGTTTCCGGTGGGTATGAACAAGGAACCCCTGTTTATCAAAATAATCATCAACCTTTCTTTTACAATGTGAGGGATCAGTGGACGAACCATTATACCATCATCAAGGACGCCAACTTTATTATAAGCCAACTTGGTAAAGCAAACGTGCTAACCGATCAGCAGAAAATTTCGCTTTCGGGCGAGGCGCGTTTGCTGAGAGCCTATGCCTATTTTCAATTGGTACAGCTGTATGGCGACGTTCCTGTTCGTACCGAGCCGTTGCCCGATTACAGCGATGAAAGCCTCAAAATTCCGAGAAGCCCGCAGGCAGAAGTTTACAAGCTGATAGTCGACGACCTCCAATTCGCAGAGTCCGGCCTTCCGGAAAATTCGGTCACGATCGGCAGGGTAAATAAGTGGGTAGCCACATCGCTTCTGGCAAAGGTGTATCTGACGATGGCCGGGGAGCCACTTAAGCAGACCGAGTTGTATGCGAAAGCCAAAGAGAAGGCAGTAGCCGTGATTAACTCCGGTAAATACAATCTAGTACTGGATTATGCACAAGTTTTCCATAACACAAGTTATACCACGGAAAGTATCTGGGAGCAGACCTATCAGGTCGGAGTTGGCGGAAACCCTTTGATGCAAAATAGTGCTACTGCCCCAGGTTATAATTATATCGTAACGCCGGCCACTTGGTTCATTAACAGCTTCCCGGAGGGTGACAGAAGAAAAGAATGGGGAATCGAGCAAAATTTTGCAGCACCTAGCGGAGCGCTGGCCCCCTTCTTCAACAAGTTCGTCAACCAAATTTGGCTGAAAGAAGGAAGGACGACCGATTACGTCGGAAGGCTGGACTTTACGGTGCCTTTGCTAAGACTGGCAGAAATGTATCTTGTTGCGGCGGAGGCCGAGAACGAGTTAAACGGGCCTGTCGCTGCATATCAATATATCAACGCAATTCGGAAACGAGCCCGGATAAATCCGGCCCAGGCCACCCATGTACCGGATTTGTCGGGACTAACCAAAGAAGCATTCCGGAATGCGGTGCTCATGGAACGGAAATGGGAATTACATCTGGAGGGAAGTACTTGGTACGATCTGAAAAGAACCGGTACACTGAACAGGATTCAGACCATCAGAGGAAATACACTGGTCAATCCCATCGGCGACTATAATAAGACCTGGTATATCCCTGATATAGAAATCCAAAATAATAACATTCAGCAAAACCCATTATACAAATAA
PROTEIN sequence
Length: 489
MIMKNIFTKSLYVLSLVTMMSGCNGALEEEPRTFVSPDAYFNGGFDSYDLAVVGVYRTIRNTLGHGAWLTRESFSDIIGPVSGGYEQGTPVYQNNHQPFFYNVRDQWTNHYTIIKDANFIISQLGKANVLTDQQKISLSGEARLLRAYAYFQLVQLYGDVPVRTEPLPDYSDESLKIPRSPQAEVYKLIVDDLQFAESGLPENSVTIGRVNKWVATSLLAKVYLTMAGEPLKQTELYAKAKEKAVAVINSGKYNLVLDYAQVFHNTSYTTESIWEQTYQVGVGGNPLMQNSATAPGYNYIVTPATWFINSFPEGDRRKEWGIEQNFAAPSGALAPFFNKFVNQIWLKEGRTTDYVGRLDFTVPLLRLAEMYLVAAEAENELNGPVAAYQYINAIRKRARINPAQATHVPDLSGLTKEAFRNAVLMERKWELHLEGSTWYDLKRTGTLNRIQTIRGNTLVNPIGDYNKTWYIPDIEIQNNNIQQNPLYK*