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scnpilot_p_inoc_scaffold_140_curated

Search features with annotation key words

Displaying items 151-164 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_140_curated_151
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(179483..179812)
DNA (330bp) protein (110aa)
Transcriptional regulator, ArsR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW26_DYAFD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACT93158.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_152
unknown

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180035..180241
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_140_curated_153
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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180304..180936
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW27_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93159.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_154
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(181235..181606)
DNA (372bp) protein (124aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ADZ81272.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ADZ81272.1};; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C2V9_SPHS2
3-oxoacyl-ACP reductase
scnpilot_p_inoc_scaffold_140_curated_155
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(181873..182277)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K2P6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG98399.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_140_curated_156
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(182574..183617)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035DA2F3
Transcriptional regulator {ECO:0000313|EMBL:EAZ79722.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
scnpilot_p_inoc_scaffold_140_curated_157
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(183835..184851)
DNA (1017bp) protein (339aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VWT2_DYAFD
alcohol dehydrogenase GroES domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ACT96832.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_158
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(184890..185678)
DNA (789bp) protein (263aa)
short chain dehydrogenase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VWT3_DYAFD
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT96833.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_159
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(185710..186963)
DNA (1254bp) protein (418aa)
L-fucose transporter n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VWT4_DYAFD
L-fucose transporter; K02429 MFS transporter, FHS family, L-fucose permease
L-fucose transporter {ECO:0000313|EMBL:ACT96834.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_160
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(186985..187332)
DNA (348bp) protein (116aa)
hypothetical protein; K03534 L-rhamnose mutarotase [EC:5.1.3.-]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382266D
Uncharacterized protein {ECO:0000313|EMBL:AEV98712.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_140_curated_161

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comp(187434..188933)
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI000374AD12
Marine sediment metagenome DNA, contig: S12H4_S13306 {ECO:0000313|EMBL:GAJ04829.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
periplasmic protein
scnpilot_p_inoc_scaffold_140_curated_162
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(188936..191287)
DNA (2352bp) protein (784aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2JP08_9FLAO
Contig6, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78866.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
PDZ/DHR/GLGF domain-containing protein
scnpilot_p_inoc_scaffold_140_curated_163
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(191352..192818)
DNA (1467bp) protein (489aa)
SusD family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VSG3_9SPHI
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:KIA92366.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
RagB/SusD domain-containing protein
scnpilot_p_inoc_scaffold_140_curated_164
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(192827..195874)
DNA (3048bp) protein (1016aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G2K1_9SPHI
Membrane protein {ECO:0000313|EMBL:KIA92446.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
TonB-dependent receptor plug
Displaying items 151-164 of 164 in total

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