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scnpilot_p_inoc_scaffold_140_curated

Search features with annotation key words

Displaying items 61-90 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_140_curated_61
unknown

Not on your lists

comp(75132..75377)
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_140_curated_62
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

75657..76268
DNA (612bp) protein (204aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VXJ8_DYAFD
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT93341.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_63
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

76321..77364
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI0003698E4A
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADB42523.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_140_curated_64
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

77575..80991
DNA (3417bp) protein (1139aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000362540F
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADZ81267.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_140_curated_65
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

81047..82513
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037014FA
Uncharacterized protein {ECO:0000313|EMBL:AKD03699.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
RagB/SusD domain-containing protein
scnpilot_p_inoc_scaffold_140_curated_66
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

82528..84609
DNA (2082bp) protein (694aa)
sulfatase (EC:3.1.6.-)
Sulfatase, family S1-20 {ECO:0000313|EMBL:CAZ96354.1}; EC=3.1.6.- {ECO:0000313|EMBL:CAZ96354.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00035EA5E9
scnpilot_p_inoc_scaffold_140_curated_67
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

84712..85098
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRE5_CHIPD
hypothetical protein; K00389 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64384.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_140_curated_68
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(85127..85888)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036011AB
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:AEI51049.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_140_curated_69
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(85904..86968)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000379605E
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEI51048.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_140_curated_70
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(87046..87978)
DNA (933bp) protein (311aa)
fasciclin n=1 Tax=Dyadobacter beijingensis RepID=UPI00038260E4
beta-Ig-H3/fasciclin
Beta-Ig-H3/fasciclin {ECO:0000313|EMBL:AEI51047.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_140_curated_71
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

88230..90629
DNA (2400bp) protein (800aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSS1_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92893.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_72
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(90658..91962)
DNA (1305bp) protein (435aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W5Q6_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95995.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_73
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

92237..92647
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W289_DYAFD
hypothetical protein; K09958 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92062.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_74
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(92712..93266)
DNA (555bp) protein (185aa)
fasciclin n=1 Tax=Dyadobacter beijingensis RepID=UPI00035E76CD
beta-Ig-H3/fasciclin
Beta-Ig-H3/fasciclin {ECO:0000313|EMBL:ACT96627.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_75
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

93603..94316
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUE4_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96626.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_76
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

94344..95135
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003623185
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96625.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_77
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(95276..97681)
DNA (2406bp) protein (802aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUE2_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96624.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_78
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

98117..98656
DNA (540bp) protein (180aa)
RNA polymerase sigma factor n=1 Tax=Dyadobacter beijingensis RepID=UPI00037B17CA
LuxR family transcriptional regulator; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACT96502.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_79
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

98732..99403
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTD7_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96501.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_80
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

99411..100619
DNA (1209bp) protein (403aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTD6_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96500.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_81
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

100708..103098
DNA (2391bp) protein (797aa)
TonB-dependent receptor n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VRJ6_DYAFD
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACT92699.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_82
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

103130..104356
DNA (1227bp) protein (409aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VRJ7_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92700.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_83
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

104578..105708
DNA (1131bp) protein (377aa)
PepSY-associated TM helix domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTD4_DYAFD
PepSY-associated TM helix domain-containing protein
PepSY-associated TM helix domain protein {ECO:0000313|EMBL:ACT96498.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_84
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

105698..108139
DNA (2442bp) protein (814aa)
TonB-dependent receptor n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTD3_DYAFD
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACT96497.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_85
unknown

Not on your lists

comp(108179..108865)
DNA (687bp) protein (229aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_140_curated_86
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

109110..111158
DNA (2049bp) protein (683aa)
Signal transduction histidine kinase, LytS n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMC3_CHIPD
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ACU64028.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_140_curated_87
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

111151..111879
DNA (729bp) protein (243aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMC2_CHIPD
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACU64027.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_140_curated_88
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

112032..115973
DNA (3942bp) protein (1314aa)
FG-GAP repeat protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W783_DYAFD
FG-GAP repeat protein {ECO:0000313|EMBL:ACT94361.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
FG-GAP repeat-containing protein
scnpilot_p_inoc_scaffold_140_curated_89
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(116006..117481)
DNA (1476bp) protein (492aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003747E38
integral membrane sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_140_curated_90
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(117483..118298)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037EB210
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEV98218.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 61-90 of 164 in total

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