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scnpilot_p_inoc_scaffold_140_curated

Search features with annotation key words

Displaying items 121-150 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_140_curated_121
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

148179..149507
DNA (1329bp) protein (443aa)
Outer membrane efflux protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG15_9BACT
Outer membrane efflux protein {ECO:0000313|EMBL:CCH52840.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
outer membrane efflux protein
scnpilot_p_inoc_scaffold_140_curated_122
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

149519..152704
DNA (3186bp) protein (1062aa)
Nodulation protein nolG n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG16_9BACT
Nodulation protein nolG {ECO:0000313|EMBL:CCH52841.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
acriflavin resistance protein
scnpilot_p_inoc_scaffold_140_curated_123
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

152724..153803
DNA (1080bp) protein (360aa)
Membrane fusion protein mtrC n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG17_9BACT
Membrane fusion protein mtrC {ECO:0000313|EMBL:CCH52842.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_140_curated_124
unknown

Not on your lists

comp(153699..153917)
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_140_curated_125
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(153941..154735)
DNA (795bp) protein (265aa)
Putative oxidoreductase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EJV7_9SPHI
short-chain dehydrogenase/reductase SDR
Putative oxidoreductase {ECO:0000313|EMBL:EDM34229.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
scnpilot_p_inoc_scaffold_140_curated_126
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(154876..155454)
DNA (579bp) protein (193aa)
TetR family transcriptional regulator n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4AB8F
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ADZ81526.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_140_curated_127
unknown

Not on your lists

155693..155860
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_140_curated_128
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

156497..158272
DNA (1776bp) protein (592aa)
Beta-lactamase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0J0_9FLAO
Beta-lactamase {ECO:0000313|EMBL:EFK33989.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
beta-lactamase
scnpilot_p_inoc_scaffold_140_curated_129
unknown

Not on your lists

158288..158731
DNA (444bp) protein (148aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_140_curated_130
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

158694..159233
DNA (540bp) protein (180aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2B1_DYAFD
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ACT92084.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_131
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

159503..160000
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUT9_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93076.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_132
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

160176..160766
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000378C975
Crp/Fnr family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACU64054.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_140_curated_133
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

160845..161432
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000362EA11
Contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ23325.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
NAD(P)H dehydrogenase (quinone)
scnpilot_p_inoc_scaffold_140_curated_134
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

162332..162808
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K825_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH00278.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_140_curated_135
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

162954..163388
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FLT2_9BACT
Calpastatin {ECO:0000313|EMBL:AKD54360.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_140_curated_136
unknown

Not on your lists

comp(163444..163731)
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_140_curated_137
unknown

Not on your lists

comp(163851..164603)
DNA (753bp) protein (251aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_140_curated_138
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(165231..165761)
DNA (531bp) protein (177aa)
Putative ABC transporter permease yknZ n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDD6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AKD57889.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_140_curated_139
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(166034..167488)
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000366274C
Uncharacterized protein {ECO:0000313|EMBL:KHJ38133.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_140_curated_140
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(167545..169002)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035E22D6
Uncharacterized protein {ECO:0000313|EMBL:ERM80926.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
RagB/SusD domain-containing protein
scnpilot_p_inoc_scaffold_140_curated_141
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(169015..172482)
DNA (3468bp) protein (1156aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000380E083
TonB-dependent receptor SusC {ECO:0000313|EMBL:KHJ38131.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_140_curated_142
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(172540..173718)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E2F94
Fec operon regulator FecR {ECO:0000313|EMBL:KHJ38130.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
FecR protein
scnpilot_p_inoc_scaffold_140_curated_143
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(173771..174349)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000371B613
ECF RNA polymerase sigma factor SigK {ECO:0000313|EMBL:KHJ38129.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
RNA polymerase sigma-70 factor, Bacteroides expansion family 1
scnpilot_p_inoc_scaffold_140_curated_144
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

174639..175790
DNA (1152bp) protein (384aa)
Beta-lactamase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJ16_CHIPD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ACU60100.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_140_curated_145
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

175967..176272
DNA (306bp) protein (102aa)
Rhodanese-like domain-containing protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SRK6_9FLAO
Sulfurtransferase {ECO:0000313|EMBL:KFD40061.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
Rhodanese-like protein
scnpilot_p_inoc_scaffold_140_curated_146
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

176465..176998
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9H6F8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR96739.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
scnpilot_p_inoc_scaffold_140_curated_147
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(177107..178180)
DNA (1074bp) protein (358aa)
arsenic resistance protein ArsB n=1 Tax=Cytophagales str. B6 RepID=UPI0003B65E7F
Arsenic resistance protein ArsB {ECO:0000313|EMBL:KIA92268.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
scnpilot_p_inoc_scaffold_140_curated_148
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(178184..178597)
DNA (414bp) protein (138aa)
protein-tyrosine phosphatase; K03741 arsenate reductase [EC:1.20.4.1]
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW23_DYAFD
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:ACT93155.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_149
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(178666..178824)
DNA (159bp) protein (53aa)
N-acetyltransferase GCN5; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
GCN5-related N-acetyltransferase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW24_DYAFD
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACT93156.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_140_curated_150
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(178847..179428)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW25_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93157.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 121-150 of 164 in total

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