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scnpilot_p_inoc_scaffold_13_curated_150

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(163558..164547)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 322.0
  • Bit_score: 629
  • Evalue 4.40e-178
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 322.0
  • Bit_score: 629
  • Evalue 2.00e-177
DNA-directed RNA polymerase subunit alpha n=1 Tax=Dyadobacter beijingensis RepID=UPI00037FCC85 similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 329.0
  • Bit_score: 639
  • Evalue 1.80e-180

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 990
ATGTCAATATTAGCTTTCCAAATGCCTGATAAGGTCGTCATGGAGAAAGCAGACGACTTTCACGGGTTGTTTGAGTTTAAGCCTTTAGAGAAAGGATACGGCGTAACCATTGGTAATGCGTTGCGTAGAATTCTCCTTTCATCTTTGGAAGGCTATGCCATCACGAGTGTGAAGTTCCCAGGCGTGCTTCACGAATTTTCTTCTATCGAAGGTATAGTTGAGGATGTTACGGAAATCATCCTGAACCTGAAAATGGTTCGTTTTAAAAAAGTTTCTGACCTGAGTGAGAGTAGGATCGTAGTAAATCTTAAAAATGTTTCCGTCATCACTGCTGGCGACATTGGCAAGTTTACAAGCGCATTTGAGGTTTTGAATCCGGACCAGGTCATTTGTCATATAGATGATCAGAAGGAGTTCGAAATGGAACTTCTCCTGGATAAAGGCAGAGGCTACGTGCCGGCAGACGAACCACGGGCTAATGAGCTCCCGTTCGGCTACATCGCAGTAGACTCGATTTACACGCCTATCAAAAATGTAAAATACAGCGTTGAAAACACGCGTGTTGAACAGCGTACCGACTACGAACGTCTTTTGATCGACATCCAAACCGATGGTTCTATCCACCCGGAAGATGCATTGAAAGGCGCTGCCAATATTCTGATCCAACACTTCATGCTGTTCTCTGACCAAACTATGACGTTTGAGAAGCAGAAAGCGGAAGAAGATAATCAGGTTGATGAGGAAATGCTGCGTATGAGAAAACTGTTGAAGACTTCACTGTCTGAGTTGGATCTTTCCGTACGTGCATACAACTGTTTGAAATCTGCGGATGTGAAAACTTTGGGTGACCTGGTGAGACTGGAAATTTCTGATATGATGAAATTCCGGAACTTCGGTAAGAAATCACTCACTGAGTTGGAACAACTGGTAGCCGACAAACAGCTCACATTTGGAATGGACGTGTCGAAGTACCGTCTGGACGAGGATTAA
PROTEIN sequence
Length: 330
MSILAFQMPDKVVMEKADDFHGLFEFKPLEKGYGVTIGNALRRILLSSLEGYAITSVKFPGVLHEFSSIEGIVEDVTEIILNLKMVRFKKVSDLSESRIVVNLKNVSVITAGDIGKFTSAFEVLNPDQVICHIDDQKEFEMELLLDKGRGYVPADEPRANELPFGYIAVDSIYTPIKNVKYSVENTRVEQRTDYERLLIDIQTDGSIHPEDALKGAANILIQHFMLFSDQTMTFEKQKAEEDNQVDEEMLRMRKLLKTSLSELDLSVRAYNCLKSADVKTLGDLVRLEISDMMKFRNFGKKSLTELEQLVADKQLTFGMDVSKYRLDED*