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scnpilot_p_inoc_scaffold_113_curated_45

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(47633..48832)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Pedobacter agri RepID=UPI00029B4C3C similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 381.0
  • Bit_score: 553
  • Evalue 1.60e-154
RND transporter {ECO:0000313|EMBL:KIA91057.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 385.0
  • Bit_score: 541
  • Evalue 1.10e-150
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 393.0
  • Bit_score: 472
  • Evalue 1.40e-130

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Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1200
ATGAATACGATCACATTACATGCGCCTGACATGGTCAAAATGCGCATGAACCAGGTTTTGTACCTCATTGCAGTTTCTTCCATGACGGCTTTAATGCTGGCCTGCCAGTCGGCTGCGGATAAGCCTGCGGCTGCCACGCCGCCGCCCGTGCTGCCGGTCGTCCAGATCAGCGGCAGTTCCGCAACCACATTCGTTGAATACCCAGCCTCCATCCAGGGCGCAGCCGACATTGACGTTCGCCCGCAGGTGAGCGGGTATTTGCAGCATACATTCGTGGATGAAGGCGCATATGTTAAGGCTGGACAAATATTGTTTCAGATTGATCCGCAGCCTTTTAAAGAAGCGCTGAACAATGCGAACGCCAGCCTGCGTGCGGCAGAGGCAGCCGTGCTGAATGCGCAGCTGGAAGTAGAAAAGCTGACGCCGCTCGTAGAAAACAAGGTTGTTTCGGATTTTCAACTGAAAACGGCTAAGACCGCCTACCAGATTGCCCAGGCCAATGCCGAGCAGGCGCGGGCCAGTGTGGCGTCGGCGGCGATCAATTTAAGTTATACCAATATCCGCGCGAAAGTGAGCGGCTACATCGGCCGCATCCCTAAAAAGCAGGGGAGCCTTGTTTCTCCCGGCGACCAGGCGGCATTGACGCAGCTTTCGGACATCCACGAAGTGCGGGCGTACTTCGCCCTGGCCGAGAATGATTTCAATGCATTCAATAACCATTATCCTGGTAAAACGCCTGCGGAGCGGATCAAAAACCTGCCTGACGTGGAGCTGCTGCTGTCTAATCATGCCGCTTATCCGTTCAAAGGCAAGATTGACATGATCGACGGCCAGTTTGATAAAAATACCGGCGCGATCACGTTACGCGCCAGTTTCGCGAATGCCAATTCGGTGCTCCGCTCGGGGAATACGGGCAAAATCCGGCTTGGTTTACAGCATAGCGACGCGGTGCTGGTGCCGCAATCGGCGACGTTCGAGATGCAGGACAAGGTTTTTGTTTTTGCATTAAATAATCAAAACAAAGTGACCAAAACGCCCATTACTGTGATCGGTAAAAGCGGCAGCCATTACCTGATTAAAGAAGGTGTGCGACCGGGCGATCAGATCGTGCTCAGCGGATTTGACCGGTTGCAGGACGGACAGGTGATTAAGCCACAGATTGTGGCCGGCCAGCCCGCCGAATTAGTGAGTAAAAATTAA
PROTEIN sequence
Length: 400
MNTITLHAPDMVKMRMNQVLYLIAVSSMTALMLACQSAADKPAAATPPPVLPVVQISGSSATTFVEYPASIQGAADIDVRPQVSGYLQHTFVDEGAYVKAGQILFQIDPQPFKEALNNANASLRAAEAAVLNAQLEVEKLTPLVENKVVSDFQLKTAKTAYQIAQANAEQARASVASAAINLSYTNIRAKVSGYIGRIPKKQGSLVSPGDQAALTQLSDIHEVRAYFALAENDFNAFNNHYPGKTPAERIKNLPDVELLLSNHAAYPFKGKIDMIDGQFDKNTGAITLRASFANANSVLRSGNTGKIRLGLQHSDAVLVPQSATFEMQDKVFVFALNNQNKVTKTPITVIGKSGSHYLIKEGVRPGDQIVLSGFDRLQDGQVIKPQIVAGQPAELVSKN*