ggKbase home page

scnpilot_p_inoc_scaffold_1862_curated_14

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 12143..13135

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YE35_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 333.0
  • Bit_score: 219
  • Evalue 4.40e-54
Uncharacterized protein {ECO:0000313|EMBL:ETZ22750.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 329.0
  • Bit_score: 381
  • Evalue 1.60e-102
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 353.0
  • Bit_score: 185
  • Evalue 2.20e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. V48 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 993
ATGAGTCGTCAACAAATAGTCGCTTTACTGGACCGGTACTTAAAGGGCGAGACCACAGAGAAAGAAAACCAACTGGTGGAACGCTGGCTGGAAGAGCACGGTAACCCCAATAAGGAATGGGATAGCCTTGACCAATCAGGTAAAGATCAGTGTCTTTCCAGCGTGTTCAGCGACATTAACAGCTCCATTCGACAGGCCGAGGTTAAAGTTGTGCCGCTGCCGCAACGAAAGCATTGGTGGGGGCAAAGAGTTGCAGCTGCCGCAGCAGTACTGCTGATCGGTTCTACCTTATACCTGAAATGGCCGTTACTGCAAAACCTCTTAAAGCCTGTACAGTTCGCAGCGCTGCAAGCTCCCATTCACCAGAAAATGGCCATCACACTCGCTGACGGTAGCCGGGTATGGATCAATGCCGGATCCGAGTTAAAATATCCTGAAACGTTCAATGGCCCGACAAGGGAGGTTTACCTCTCCGGTGAAGCGTATTTTGACATTCAGCATGATACTGCCAAACCTTTTATTATTCACACCGGTAACCTGCTGACAAAGGTGTTGGGTACGGCATTTAATATCAAGGAGGACAAAAGCAACCATACAATCCAGGTAACGGTCACCCGTGGTAAGGTGAGCGTTGCCAACGGTGGTGAATTACTGGGTATACTTCGCCCTAACCAGCAGATCAGTTTCAACACCTTGAAAGAGGAGGTTTTACAGGCAACTGTTGATGCCGCGCAGGTCATTGCCTGGCAGCAAAGTGACCTGCATTTTGAAGATGTGAGCTTTGGAGAGGCAATTGCGCAATTGCGACGGCACTTCGATGTGAAGATCAGCTTCGGTAATGCCAAATTGAAAGACTGCCGTTTTACCGGAACATCCATCCATGGTGAACACTTGGAGAAAATACTAAAAGTAATGTGCGCTTTTAACAACGCCACTTATCGGGTCGAGCCGGACGGCAGCATCATCATAGACGGAGCTGGCTGTAACAACTAA
PROTEIN sequence
Length: 331
MSRQQIVALLDRYLKGETTEKENQLVERWLEEHGNPNKEWDSLDQSGKDQCLSSVFSDINSSIRQAEVKVVPLPQRKHWWGQRVAAAAAVLLIGSTLYLKWPLLQNLLKPVQFAALQAPIHQKMAITLADGSRVWINAGSELKYPETFNGPTREVYLSGEAYFDIQHDTAKPFIIHTGNLLTKVLGTAFNIKEDKSNHTIQVTVTRGKVSVANGGELLGILRPNQQISFNTLKEEVLQATVDAAQVIAWQQSDLHFEDVSFGEAIAQLRRHFDVKISFGNAKLKDCRFTGTSIHGEHLEKILKVMCAFNNATYRVEPDGSIIIDGAGCNN*