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scnpilot_p_inoc_scaffold_270_curated_23

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(26823..28040)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit n=2 Tax=Flavobacterium RepID=J1AIS4_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 382.0
  • Bit_score: 461
  • Evalue 1.10e-126
RND transporter {ECO:0000313|EMBL:KEQ30925.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 402.0
  • Bit_score: 477
  • Evalue 2.60e-131
RND family efflux transporter MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 382.0
  • Bit_score: 461
  • Evalue 3.40e-127

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Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1218
ATGAAAAGAATCGCATTTTTGAGGCTCGCCACTTTTGCATCTTTTGCCCCCGGGATGCTTTTGATTGCTTGTAAAGATGATCAAAAAAAACAAGCTGCACAGGCCGGTCAGAAGACTTACACCTGCCCTATGCATCCACAGATAGTCCAGGACAAACCAGGTAGTTGTCCGATATGTGGCATGGATCTGGTCATCTTCGATAAAAGTAGTAAAGATGCCTCTATTACATTGGGCGAAAGCCAAATAGCACTGGCCAATATTACTACCATGGTAGTAGGAAACGGCCTTTTGTCTAACTCTAAAAGACTTAATGGCCGGCTTGCTGTTAACCCTGACCAGACTGCGGTTGTATCCAGCCGTGTCGCAGGGCGTATTCAGGTGCTATTCATCAAAGAAACGGGTGTGCCGGTAAAGAAAGGACAGGCGCTTTATAAAATATACTCTGAACAGCTTTCCGCCCTGCAGCAGGAATATTTATTGGCATACGCACAAGCAAAGCAGTTCCCTTCCGACGCGCGCTTTGGAGCCATTGAAAAGGCCGCCCGTCAAAAGCTGCGTTTGTATGATCAAAGTGAAGAAGATATAAACGGCTTAACGGCAAGCCAGAAGCAGGAGCCATACATTACTTACCGCGCGCCGATCAGCGGCACCGTATCTGAGCTGTCAGTAACAGAAGGCCAATATGTATCGGAGGGGAGCGCAGTACTACGCCTTGAAGACTACTCATCTTTATGGGTTGAAGCCGATATCTATCCAGCAGAAGCGGCCAGCATCCGCACCGGGCAAAAGGTACAGGTACAAGTCGCTGGCTGGGAAGATAAACCCCAGCCAATGCGCATCGATTTTGTTATACCGGCAATTCAGACTGGCAGCCAGCTGATGCAGGTCCGGGGAACTATCCCAAACCCAGGCAGCCGGTGGCAGCCAGGATTACAAGCCAATTTGATGTTACCGGTTACTGGTACGATAAATGCAATGACTTTACCTGTCGATGCAGTGATCCGTGACGCAAATGGGGCGCACGTGTGGATTGAAACGAAGCCCGGAACCTTCAAGGCTCGCATGGTATCGATCGGTATGCAAAATGCTGACCTGGTAGAAGTTAAGGAAGGAATTGCCAAGGACGAGAAAGTGGTTGTTACAGGTGCTTATCTTTTATACAGTGAATATGTACTGAAAAAGGGATCTGACCCCATGGCACTGCATCAACATGAATAA
PROTEIN sequence
Length: 406
MKRIAFLRLATFASFAPGMLLIACKDDQKKQAAQAGQKTYTCPMHPQIVQDKPGSCPICGMDLVIFDKSSKDASITLGESQIALANITTMVVGNGLLSNSKRLNGRLAVNPDQTAVVSSRVAGRIQVLFIKETGVPVKKGQALYKIYSEQLSALQQEYLLAYAQAKQFPSDARFGAIEKAARQKLRLYDQSEEDINGLTASQKQEPYITYRAPISGTVSELSVTEGQYVSEGSAVLRLEDYSSLWVEADIYPAEAASIRTGQKVQVQVAGWEDKPQPMRIDFVIPAIQTGSQLMQVRGTIPNPGSRWQPGLQANLMLPVTGTINAMTLPVDAVIRDANGAHVWIETKPGTFKARMVSIGMQNADLVEVKEGIAKDEKVVVTGAYLLYSEYVLKKGSDPMALHQHE*