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scnpilot_p_inoc_scaffold_270_curated_84

Organism: scnpilot_dereplicated_Dyadobacter_1

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(90420..91037)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00035DCBBC similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 205.0
  • Bit_score: 234
  • Evalue 1.10e-58
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 200.0
  • Bit_score: 211
  • Evalue 2.30e-52
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AFK04689.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 200.0
  • Bit_score: 211
  • Evalue 1.00e-51

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Taxonomy

Emticicia oligotrophica → Emticicia → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 618
TTGACCTTGCTGTTCAAAAGGAAGTCTAAATTCGATGAACAGGACCTGAATAGTGTCCTTGAAGCCTGTAAACTCAGGAATCCACAAGCGCAACGCTGCCTGATCCGCCATTTCGCAGGATATGCAAAAAGCGTGGCAGTAAGGTATTCAGCTAATCGAGAGGAAGCCGAAGAGATTATCAACGATTCATTTCTGAAAGTTTTTTTGAATCTGAAGCAGTACGATGTAAGCTTTCCTTTCAAGTCATGGTTTCGAAAAATCATCATCAATACGGCTATTAGTTACCATCGGAAAAATTTGCAATGGCAACTTAATACCGAAGAACTTGGTGATATTGATGTAGCTGATGTGAATATCGATACCATTAGTGCTATAACTTCAGAAGAGATTCTTGAATTAATCCAAGGGCTCCCCCCGGCCTACAGGGTTGTCTTTACTCTATTTGTTGTCGATGGATATTCTCATAAGGAAATCGCCGGGATGCTTGGCATTCAAGAAGGAACCTCCAAGTCCAACCTTCGAGATGCGAGAAAAAAACTGCAGACTATGATCAAGGCCTGTCATCCAGACTTGTATCAACTATACAACTGTCCAAATAAAAGGTCCAATGGAAACTGA
PROTEIN sequence
Length: 206
LTLLFKRKSKFDEQDLNSVLEACKLRNPQAQRCLIRHFAGYAKSVAVRYSANREEAEEIINDSFLKVFLNLKQYDVSFPFKSWFRKIIINTAISYHRKNLQWQLNTEELGDIDVADVNIDTISAITSEEILELIQGLPPAYRVVFTLFVVDGYSHKEIAGMLGIQEGTSKSNLRDARKKLQTMIKACHPDLYQLYNCPNKRSNGN*