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scnpilot_p_inoc_scaffold_1027_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1027_curated_1
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1..4758)
DNA (4758bp) protein (1586aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N8W8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EAZ96057.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1027_curated_2
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5098..6027)
DNA (930bp) protein (310aa)
Lytic transglycosylase catalytic n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKD3_FLUTR
lytic transglycosylase catalytic subunit
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_1027_curated_3
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

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comp(6024..7100)
DNA (1077bp) protein (359aa)
glycosyl transferase; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.-]
Glycosyl transferase, family 4, conserved region-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKD4_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_1027_curated_4
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

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comp(7107..7652)
DNA (546bp) protein (182aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
DtdP-4-dehydrorhamnose 3,5-epimerase and related enzymes id=4364277 bin=GWF2_Bacteroidetes_29_10 species=uncultured Sphingobacteriales bacterium HF0130_33B19 genus=unknown taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_p_inoc_scaffold_1027_curated_5
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7649..9967)
DNA (2319bp) protein (773aa)
capsular exopolysaccharide family (EC:2.7.10.2)
Capsular exopolysaccharide family {ECO:0000313|EMBL:AEA44039.1}; EC=2.7.10.2 {ECO:0000313|EMBL:AEA44039.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Capsular exopolysaccharide family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKD6_FLUTR
scnpilot_p_inoc_scaffold_1027_curated_6
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9973..10770)
DNA (798bp) protein (266aa)
Polysaccharide export protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKD7_FLUTR
polysaccharide export protein; K01991 polysaccharide export outer membrane protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_1027_curated_7
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10764..11942)
DNA (1179bp) protein (393aa)
Glycosyl transferase group 1 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I984_FLUTR
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEA44041.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_1027_curated_8
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12022..13485
DNA (1464bp) protein (488aa)
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase (EC:3.4.16.4); K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I985_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_1027_curated_9
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13532..14929
DNA (1398bp) protein (466aa)
Orn/DAP/Arg decarboxylase 2; K01585 arginine decarboxylase [EC:4.1.1.19]
Orn/DAP/Arg decarboxylase 2 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJN4_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_1027_curated_10
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

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15158..15532
DNA (375bp) protein (125aa)
Phosphoinositide-3-kinase, regulatory subunit 4 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJN5_FLUTR
phosphoinositide-3-kinase, regulatory subunit 4
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_1027_curated_11
uncultured Flavobacteriia bacterium, Flavobacteriia, Bacteroidetes, Bacteria

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comp(15600..15962)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=uncultured Flavobacteriia bacterium RepID=H6RGD2_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:CCG00093.1}; TaxID=212695 species="Bacteria; Bacteroidetes; Flavobacteriia; environmental samples.;" source="uncultured Flavobacteriia bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1027_curated_12
unknown

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16110..17726
DNA (1617bp) protein (539aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1027_curated_13
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17894..19351
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJS9_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_1027_curated_14
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19348..20718
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJS8_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43968.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_1027_curated_15
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20720..22384
DNA (1665bp) protein (555aa)
Membrane bound O-acyl transferase MBOAT family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJS7_FLUTR
membrane bound O-acyl transferase MBOAT family protein
Membrane bound O-acyl transferase MBOAT family protein {ECO:0000313|EMBL:AEA43967.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_1027_curated_16
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22793..24505)
DNA (1713bp) protein (571aa)
Protease-associated PA n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6KZV1_SAPGL
protease-associated PA
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_1027_curated_17
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24600..25346)
DNA (747bp) protein (249aa)
ferredoxin; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit n=1 Tax=Imtechella halotolerans K1 RepID=I0WJS5_9FLAO
Succinate dehydrogenase, iron-sulfur subunit (Fumarate reductase, iron-sulfur subunit) {ECO:0000313|EMBL:EDP98339.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
scnpilot_p_inoc_scaffold_1027_curated_18
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(25373..27376)
DNA (2004bp) protein (668aa)
menaquinone-dependent succinate dehydrogenase/fumarate reductase, flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=2 Tax=Myroides RepID=H1Z8M7_MYROD
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:EKB08136.1}; TaxID=883155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides [odoratimimus] CIP 103059.;"
scnpilot_p_inoc_scaffold_1027_curated_19
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27398..28306)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEG1_FLUTR
hypothetical protein; K00241 succinate dehydrogenase cytochrome b556 subunit
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_1027_curated_20
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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28869..30482
DNA (1614bp) protein (538aa)
CHU large protein; uncharacterized id=4439648 bin=GWF2_Bacteroidetes_35_48 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
Displaying 20 items

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